Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03348 ATGAGCAGCCAGACGTCGAAGCCGAACGTGGATGGAGTGCAGAGCGATGTGAAGGTGGTGGAGAGGCCAATGAGAGAAAGGCCCTACGATCTCTTGCTGCGGTTTCTTGGCCTCTCACTCACTCTGGTAGCAACCATCATTGTTGGTGTTGACAATGAGACCAAAGTCATCTCCTACGCCGAATTGCAATTCAAAGCCACTGCTAAGTGGGAATATGTCTCTGCTATTGTGTATTTCTTGGTGATAAACGCAATAGCATGTTCATACGCTGCTGCATCTTTGGTTATCACGTTGATGGTGAGAAGCAGTGGAACAAAAAATGAAATGACACTTTTGGGGCTAACAGCGCTGGATCTTGTGATGATGGCATTGTTGTTCTCAGCCAACGGAGCAGCCTGTGCAGTGGGAGTGATAGCACAGAAGGGGAACTCGCACGTGCAATGGATGAAAGTGTGCAACGTCTTTGATGCCTATTGTCGCCACGTCACTGCTGCATTGGCACTCTCCCTCATTGGCTCCTCTGTCTTTCTCTTGCTGGTGCTCCATTCTGTTCTCAAACTCCATTACAGGTCAAGAACAAGAAGCTAG 588 0.4864 MSSQTSKPNVDGVQSDVKVVERPMRERPYDLLLRFLGLSLTLVATIIVGVDNETKVISYAELQFKATAKWEYVSAIVYFLVINAIACSYAAASLVITLMVRSSGTKNEMTLLGLTALDLVMMALLFSANGAACAVGVIAQKGNSHVQWMKVCNVFDAYCRHVTAALALSLIGSSVFLLLVLHSVLKLHYRSRTRS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03348 195 Pfam Casparian strip membrane protein domain 28 173 IPR006702 -
Pumo5g03348 195 NCBIfam plant integral membrane protein TIGR01569 31 186 IPR006459 -
Pumo5g03348 195 PANTHER CASP-LIKE PROTEIN 1U1 24 189 IPR044173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03348 Pumo-Chr5 82623439 82625053 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03348 - - gmx:100817307 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03348 5 82623439 82625053 Pumo5g03348 5 82623439 82625053 ECH