Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03340 ATGCAGGAAGCGAAGGTGATAATAATCGGTGCCGGAACTTCTGGCATTGCCACCGCAGCATGCTTAACGAAGCAATCGATACCTTACATAATCCTCGAGAGAGAAGATTGTTTCGCTTCCCTGTGGCAGAAATACACCTACGACCGTCTCCACCTTCATCTCAGGAAGCACGTCTGCGAGCTACCGCACTTTCCGTTTCCCAAGTCTTACCCTCACTACGTGCCTCGGAAGCAGTTCATAGACTACTTGGGGAACTACGTGAACCACTTTGAGATTAACCCTTTCTACCAGCGTGCCGTGGAGCTTGTGGAGTATGATGGGAAGAAAGGGTTTTGGAAAGTGAAGGCTGAGAATAGAAGATCTGGTGCGGTTGAGGAGTACGCTGGAAGGTACTTGGTCGTGGCCAGTGGCGAAACGGCTGAGCCTCGTGTGCCTGAGATTGAAGGGTTGGAGGGTTTCAATGGTAAAGTGATTCACTCAACAGGGTACAAAAACGGGAACGACTTTAAGGATAAACATGTTCTGGTTGTTGGATCTGGCAATTCTGGCATGGAGATTGCGCTAGACTTGGCCAATTTTGGTGCCAAACCTTCCATCATTGTTCGCAGCCCGGTTCATTTTCTATCGAGGGATATGATGTATTATGCCTCAGTTTTGCTCAATTATTTGTCGCTAAGTACGGTGGAGAAATTGTTGGTGATGGTTAGCAAGATTGTGTACGGAGATCTGAGTGAGTATGGAATACCGTTTCCCAGTGAGGGGCCCTTCACCATGAAGATGAAGTATGGTAAGTTCCCAATCATCGACTTGGGAACTGTCAACAAAATCAAATCTGGAGAGATACAGGTGTTGCCAGCGGAAATAGAAAGTATAAGAGGTAACGAAGTTTTGTTCCGGGATGGCAAATCACACCCATTCGACTCAATTGTTTTCTGCACAGGCTTCAAGAGATCAACTCAAAAGTGGCTTAAGGGGGGTGATGATCTTCTAAATGAGGATGGCTTTCCAAAGCCTAGTTTCCCAAATCATTGGAAAGGTCAGAACGGTTTGTATTGCGTTGGACTGTCAAGAAGAGGTTTCTTTGGAGCTAACATGGATGCCCAAAACGTAGCAAATGATATTGCCTCGTTAATTCCTCAAGAAGAAAGAGAAGGAATTTGTGTCATGTAA 1170 0.4598 MQEAKVIIIGAGTSGIATAACLTKQSIPYIILEREDCFASLWQKYTYDRLHLHLRKHVCELPHFPFPKSYPHYVPRKQFIDYLGNYVNHFEINPFYQRAVELVEYDGKKGFWKVKAENRRSGAVEEYAGRYLVVASGETAEPRVPEIEGLEGFNGKVIHSTGYKNGNDFKDKHVLVVGSGNSGMEIALDLANFGAKPSIIVRSPVHFLSRDMMYYASVLLNYLSLSTVEKLLVMVSKIVYGDLSEYGIPFPSEGPFTMKMKYGKFPIIDLGTVNKIKSGEIQVLPAEIESIRGNEVLFRDGKSHPFDSIVFCTGFKRSTQKWLKGGDDLLNEDGFPKPSFPNHWKGQNGLYCVGLSRRGFFGANMDAQNVANDIASLIPQEEREGICVM 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03340 389 SUPERFAMILY FAD/NAD(P)-binding domain 4 214 IPR036188 -
Pumo5g03340 389 PIRSF FMO 2 369 IPR000960 GO:0050660|GO:0050661
Pumo5g03340 389 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 5 378 - -
Pumo5g03340 389 PRINTS FAD-dependent pyridine nucleotide reductase signature 173 191 - -
Pumo5g03340 389 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Pumo5g03340 389 Gene3D - 1 380 IPR036188 -
Pumo5g03340 389 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Pumo5g03340 389 Pfam Flavin-binding monooxygenase-like 5 316 IPR020946 GO:0004499|GO:0050660|GO:0050661
Pumo5g03340 389 SUPERFAMILY FAD/NAD(P)-binding domain 170 378 IPR036188 -
Pumo5g03340 389 PRINTS Pyridine nucleotide disulphide reductase class-II signature 169 193 - -
Pumo5g03340 389 PRINTS Pyridine nucleotide disulphide reductase class-II signature 5 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03340 Pumo-Chr5 82523891 82528046 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03340 K11816 - gmx:100777958 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03340 5 82523891 82528046 Pumo5g03340 5 82523891 82528046 ECH