Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03339 ATGCAGCAGAGAGTGATAATCGTGGGAGCAGGCCCTTCAGGCCTCTCCGCCGCTGCATGCTTCACGAAACATTCCATTCCGTACATAATCCTCGAAAGAGAAGACTGTTCCGCTTCTCTCTGGAAAAAATACTCCTACGACCGCCTCCACCTTCATCTCAGGAAGCAGTACTGCGAGCTTCCGCACAAACCGTTCCCACCCTCGTTCCCTCCCTACGTGCCCAAGAAGCAGTTCCTGCAGTACCTCGACGACTACGTGTCCCACTTCGGAATCAATCCTCTGTATCGCAGAACGGTGGAGCTTGCGGAGTACGATAAGGGGTGTGGGGAGTGGAGGGTGAGGGCCGTGAATGGGGAATCCGGTGAGGTGGAGGAGTACCGTGGGAGGTTTCTGGTGGTGGCGACTGGGGAGACCAGTGACCCTTTTGTGCCGGAGGTGGAAGGGCTGAGTAGCTTCCCTGGGAAGCTGATTCATTCAACTGGGTTTAGTTCTGGGAAGGAGTTCGAAGGTGAGCATGTTCTGGTTGTCGGGTCGGGGAATTCCGGCATGGAAATCGCCTTGGACCTTGTCAACCATGGTGCCAAAACCTCCATTCTCGTCAGAAGCCCGGTTCATTTTCTATCAAGGGAGATGGTGAGTTTGGGGTTGTTTCTGTTGAAGTATTTGTCGTTGAGCACCGTGGACTCACTGATGTTGATACTTAGCACCATGGTTTACGGGGATGTGACCAAATATGGGGTTGCAAGGCCCAATGAGGGTCCCTTCCATATGAAGGTCAAGTATGGAAAGTATCCAGTTATTGACGTCGGAACCTATAAAAAAATCAAGTCTGGAGAGATAAAGGTTTTGCCAGCAGAAATAGAAAGCGTAAGGGGCAAGGATGTCTTATTCAAGAATGGTGAGTTGCACCCATTTGACTCCATTGTTTTTTGCACCGGCTTCAAGAGATCAACCAACAAGTGGCTTAAGGGGGATGATTACCTTCTGAATGATGATGGTCTTCCGAAGCCGAGTTACCCCATCCATTGGAAGGGAAATAATGGTTTGTACTGCGTTGGGCTATCAAGGAGAGGCTTCTATGGCGCTGCCGCAGATGCTGAAAATATAGCAAATGATGTAAGCTCCTTCACGCAACATACCTGTCCCTAA 1149 0.5048 MQQRVIIVGAGPSGLSAAACFTKHSIPYIILEREDCSASLWKKYSYDRLHLHLRKQYCELPHKPFPPSFPPYVPKKQFLQYLDDYVSHFGINPLYRRTVELAEYDKGCGEWRVRAVNGESGEVEEYRGRFLVVATGETSDPFVPEVEGLSSFPGKLIHSTGFSSGKEFEGEHVLVVGSGNSGMEIALDLVNHGAKTSILVRSPVHFLSREMVSLGLFLLKYLSLSTVDSLMLILSTMVYGDVTKYGVARPNEGPFHMKVKYGKYPVIDVGTYKKIKSGEIKVLPAEIESVRGKDVLFKNGELHPFDSIVFCTGFKRSTNKWLKGDDYLLNDDGLPKPSYPIHWKGNNGLYCVGLSRRGFYGAAADAENIANDVSSFTQHTCP 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03339 382 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 3 375 - -
Pumo5g03339 382 PIRSF FMO 1 357 IPR000960 GO:0050660|GO:0050661
Pumo5g03339 382 SUPERFAMILY FAD/NAD(P)-binding domain 1 206 IPR036188 -
Pumo5g03339 382 Gene3D - 1 379 IPR036188 -
Pumo5g03339 382 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Pumo5g03339 382 PRINTS FAD-dependent pyridine nucleotide reductase signature 5 24 - -
Pumo5g03339 382 PRINTS FAD-dependent pyridine nucleotide reductase signature 172 190 - -
Pumo5g03339 382 PRINTS Pyridine nucleotide disulphide reductase class-II signature 168 192 - -
Pumo5g03339 382 PRINTS Pyridine nucleotide disulphide reductase class-II signature 4 26 - -
Pumo5g03339 382 Pfam Pyridine nucleotide-disulphide oxidoreductase 6 204 - -
Pumo5g03339 382 SUPERFAMILY FAD/NAD(P)-binding domain 171 371 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03339 Pumo-Chr5 82513270 82517084 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03339 K11816 - gmx:102668138 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03339 5 82513270 82517084 Pumo5g03339 5 82513270 82517084 ECH