Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03312 ATGCGAAGAGCAAGAAATATGAGACCAAACATCGTTTCTGAGGCAGGGTTGCCTACTAGGATGAGTCAATGGTGGGAAAGCATTCCATTTCTCACTTCTGCAGTGGTGGTTGTCTGTGGAGTCATTTACTTGGTTTGTCTTTTGGTTGGATATGATTCCTTCTACGAGTCATCATGTGTGAGACGTCCAAAATTCATTGTTTGCACCGGTGGAAATCCTTCGGGTTATATTCCTACACATACAAGCCAAAATTCAACAACCAGTGGATTACTTTCTGGAAATATTTGGAGGAACCTATCATCATTTATGCCTCAAAGAGAAGTGTCTACTCAGTCAACTGAGGAGAGTAGGTTCCCTGGTAGGGGAAGGACCCTTTGTTCTGGTCAAGGTCAAACTGCTTCTCATCTTCATTCAGATTCAAACCTTCAAGCTAGACTTTTGGAGGATAGCAGTCCCAATAATCCTTTAGATTCATCCACTCCTAGTAATACTCAACAGTTGTCAGAAGGAAGGCATTCAGTTGACCACGTAGCTACAGCAACTGCTGGTGTTCCACAGCATCAGGGTGCAGTTGCTTCGGAAGAAGGGATTAAAAAACTTGTATCAATGGGCTTTGATAGGACGCAGGTGGAAGTGGCACTGGCAGCTGCTGATGGTGATCTCAATGTGGCAGTGGAAATACTCATGAGCCAGCAGGGTTGA 702 0.4444 MRRARNMRPNIVSEAGLPTRMSQWWESIPFLTSAVVVVCGVIYLVCLLVGYDSFYESSCVRRPKFIVCTGGNPSGYIPTHTSQNSTTSGLLSGNIWRNLSSFMPQREVSTQSTEESRFPGRGRTLCSGQGQTASHLHSDSNLQARLLEDSSPNNPLDSSTPSNTQQLSEGRHSVDHVATATAGVPQHQGAVASEEGIKKLVSMGFDRTQVEVALAAADGDLNVAVEILMSQQG 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03312 233 CDD UBA_At3g58460_like 194 229 - -
Pumo5g03312 233 Pfam UBA/TS-N domain 195 228 IPR015940 -
Pumo5g03312 233 MobiDBLite consensus disorder prediction 105 173 - -
Pumo5g03312 233 SMART uba_6 193 230 IPR015940 -
Pumo5g03312 233 SUPERFAMILY UBA-like 186 232 IPR009060 GO:0005515
Pumo5g03312 233 Gene3D - 162 233 - -
Pumo5g03312 233 MobiDBLite consensus disorder prediction 125 172 - -
Pumo5g03312 233 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 191 231 IPR015940 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03312 - - gmx:100805745 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03312 5 82287149 82293097 Pumo5g03312 5 82287149 82293097 ECH