Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03307 ATGGGCTTTGATTGGCTACATAAAAACCATAACGGGCTTTTTGTTTATCTGCTTCGAGTGCTTCGACCTTCGGGGATCCCCTTTGCTTTGCCACACTCTGCGTCATTTTGCAGGTACATTAATCAAGATAATACTTCTGAAGTGTTGTTGAGGTTATGGAGCGTCAAGGTCATGATTATGCAGCAGCATCTGCCATGGCATATGCTCAACAGCAGCGACAAGCTGCTAATATGCAACAGCAGCAGCAGTTTGGATTTCATCCCCAGCATCAGCAGTTTCCTTCATCAATGCACGGTCCTCCTTTTATACCCCCAGGTCCTGGTCCTGCACACCCCCCTATGCAACAGTTCCCTTATCATCATGCCCTGCAGCAGCAGCAACAGCAACAGCAACAGCCACATCCACAATTACACCCTCATGCCCCTCCCCCGCCTCATCTTCTTCTTCAGCAGCAACAGCACCAAGGACCGCCCAGCATTCCCTTCGCATTATCCTCCTCCTCTTGTTCCATCTCCGTTTTATGATTCTACGCCCCCGGTTGCTCCCCCTTCTGATCCCGAGCTCCACAAGCGAATTGACAAGCTTGTTGAGTATGCGGTGAAAAATGGCCCTGACTTTGAAGCTATGATATGTGAAAAACAACGGGATAATCCTTCCTATAGTTTCCTCTTTGGTGGGGAAGGCCATGGTTACTACCGTTATAAGCTTTGGTTATCAACTCGTCCCCCGGGTGGTCCATTTAACCCACCTTTTCCATCATCATCCATGCCCATGATCCATCCTCCAAATCCAATGATGAATCCGTCTCCTCTAAATGCTTCTCCAATGAACACCGCAGGAATTGGCTCTTCACCTTCGATGCTAGGTCCACCTCCTTTCCAACAGTTCTATGATCAACAACACCACCATCAACATCCTCAGTCTTTTGGGCTTCCTGGTCGGCCTGAGTATGATCCGTCATCCAAGTCTTTCAAAGGGATCACTGGGCCACTTCCATCTGATGTCGCAATGGAGCTTGGCAATGTCCTTAACAATCTGAATGGTACAAAAGAATCCATCAAAGGTGCAAAACTTTGGTTCATGCAGAGATCTCCATTTGCACCAGCCCTAGCAGAGGCTCTTAGAGATAGGGTCTTTGCATTGGATGAAGTTGAGAGACAGTTACACATAATATACCTTGCCAATGACATACTTTTCGACAGCTTAAATCGGAGGACAAGCAGTAATGACCTTGACGGTGAAGCTCTTGCCTTTAAACCTGTTTTAGGCTCCATGCTTGCAAGAATTTATCATAATCCACAAAGCAATGACGAATACAGGAAAAGATTGCAGCAAATGGTGGAGTTCTGGTCTTCTAAAAAGGTATACGATCAAGAGACTATATCTTTACTAAAGGGTGAGATGATTGGTGGGCCACAAACAAATCCTTTTCCTGGGGCTTCGAAGGATTTATCTTCTGCTTCAGCAGAATCAGTTACAGGAATACTGCAGACACCTAACCATGTTGCCCAGCAGTGGCAATCTGATAGGTTAGGCTCTGGTTCAAGTGCCATAGACCAAGATCGTCCTGATAAACATGCAGCTCCAGCACAGTCACTATCAGTACCCCTAGCAGCTCAGCAGTTTCTTCCAAATTCTGCTCCTCCTAGTGCCTTTCCTGGGTCCATGCCTATACCATCTTCTGTTCAACCAGCTAACCAAGCACCTGGTGCTCATTTATTGCCCCCTCCATCATCCAACACCAGTGAACAATTGCCACCATATCCATTATTCCCTCCTGGCCTCATTCCTGGAATGGTTAGAAAGATGCAGATCGGTAGTGGGGTCCCATATTCTCCTTTGAGCCCTTTAGATATCCCAACTATAATACCGCCATCGACTGTACCGCCATCAGAAATTCTTCAAAGAGTGTCAAAATTTTTTAAAGAAATTGGAGAGGTAAATCCTTCTGAGGGCCCTATGAATTCTGATTCAAGAGATGAAGATGATGAATATGATAGAGAATATGAGAGGGAGCCTCCGGTACGAAAGGGAGGTGCTTGCATACCTCCACCCCCAAACTTGCAGGTTGATCCAGAGACAGGGACCTATGCTGATGGGAGTGTAGAACGGAAACCAGGATCCAGTGGCTCGGGTAGGTTGGGGCTTGGGGCCACAGCCAATCCCAATGAGGTGAGTCAGTATGATGATGTATATACATCTTACAGGAAGCAGAGAAGCACCAATTACCATTCATCAATGAGTGCTAGGGCCGCAGCGAGATGA 2265 0.4689 MGFDWLHKNHNGLFVYLLRVLRPSGIPFALPHSASFCRYINQDNTSEVLLRLWSVKVMIMQQHLPWHMLNSSDKLLICNSSSSLDFIPSISSFLHQCTVLLLYPQVLVLHTPLCNSSLIIMPCSSSNSNSNSHIHNYTLMPLPRLIFFFSSNSTKDRPAFPSHYPPPLVPSPFYDSTPPVAPPSDPELHKRIDKLVEYAVKNGPDFEAMICEKQRDNPSYSFLFGGEGHGYYRYKLWLSTRPPGGPFNPPFPSSSMPMIHPPNPMMNPSPLNASPMNTAGIGSSPSMLGPPPFQQFYDQQHHHQHPQSFGLPGRPEYDPSSKSFKGITGPLPSDVAMELGNVLNNLNGTKESIKGAKLWFMQRSPFAPALAEALRDRVFALDEVERQLHIIYLANDILFDSLNRRTSSNDLDGEALAFKPVLGSMLARIYHNPQSNDEYRKRLQQMVEFWSSKKVYDQETISLLKGEMIGGPQTNPFPGASKDLSSASAESVTGILQTPNHVAQQWQSDRLGSGSSAIDQDRPDKHAAPAQSLSVPLAAQQFLPNSAPPSAFPGSMPIPSSVQPANQAPGAHLLPPPSSNTSEQLPPYPLFPPGLIPGMVRKMQIGSGVPYSPLSPLDIPTIIPPSTVPPSEILQRVSKFFKEIGEVNPSEGPMNSDSRDEDDEYDREYEREPPVRKGGACIPPPPNLQVDPETGTYADGSVERKPGSSGSGRLGLGATANPNEVSQYDDVYTSYRKQRSTNYHSSMSARAAAR 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03307 754 PANTHER SR-RELATED CTD ASSOCIATED FACTOR 6 178 753 IPR039037 GO:0006874
Pumo5g03307 754 MobiDBLite consensus disorder prediction 714 748 - -
Pumo5g03307 754 Pfam Surp module 192 237 IPR000061 GO:0003723|GO:0006396
Pumo5g03307 754 SMART 558neu5 338 469 IPR006569 -
Pumo5g03307 754 Gene3D Surp module 175 241 IPR035967 GO:0003723|GO:0006396
Pumo5g03307 754 MobiDBLite consensus disorder prediction 508 532 - -
Pumo5g03307 754 Pfam CID domain 339 462 IPR006569 -
Pumo5g03307 754 MobiDBLite consensus disorder prediction 645 754 - -
Pumo5g03307 754 MobiDBLite consensus disorder prediction 248 269 - -
Pumo5g03307 754 MobiDBLite consensus disorder prediction 298 322 - -
Pumo5g03307 754 ProSiteProfiles SURP motif repeat profile. 191 235 IPR000061 GO:0003723|GO:0006396
Pumo5g03307 754 Gene3D - 336 470 IPR008942 -
Pumo5g03307 754 ProSiteProfiles CID domain profile. 331 472 IPR006569 -
Pumo5g03307 754 MobiDBLite consensus disorder prediction 544 587 - -
Pumo5g03307 754 MobiDBLite consensus disorder prediction 472 492 - -
Pumo5g03307 754 SUPERFAMILY Surp module (SWAP domain) 163 237 IPR035967 GO:0003723|GO:0006396
Pumo5g03307 754 SMART surpneu2 189 241 IPR000061 GO:0003723|GO:0006396
Pumo5g03307 754 MobiDBLite consensus disorder prediction 478 492 - -
Pumo5g03307 754 MobiDBLite consensus disorder prediction 556 579 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03307 - - gmx:100802329 1018.07