Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03288 ATGGAATCTGAAAACGGGGTTGCTGTGGAGGAAGAGAAACGTGTTATTGGGGTAACAACCAAGGTGGAGAATGTAAAGAAAGAAGTTGAAAAGGACTGTAATGGTGCAGAAATTCAGACCAAGAATGAGGTATCTAAACCCACAGTGGAGAAGGCTAAAGGCTCGATTTCTGCTGGTGACAAAATTGCAGTTGAAGCCTCTAAAACTTCTTCTGCAAATAAAAATTCAAAAGGTGCTACTACTAAGGAAACTGGTGGTAGAGCAAGTGTTGCTTCCAAGAACAACAAATATGCCAAAGATAAATCCATTTTGAAGGGTCCAAGTTCAATATCTCAAAAACAAAGGCCATCCCTTTCCCAAAGCCTTTCTTTCCCTGCCAAATCAGATGGTGAAGATGCTATGCAGAAAAGCATTGATGGGTATCTTGTGAAGCCAAAAGTTAGAAATATTCAAGGTAATGGGATTAGAGGTGAGGCCCCCAGTTCGTCATTTAAACAAGTCCACAAACTCAGAAGTCAACTCACTGGCAAAAACCAACACTGGCATGCCTGTTTTGTGTACCAGTTTGGAAGGTCCACTACAGTTACTGCAGTCAACAAGAGCCAAACTTCTGAGGCATCGTTATCCGTTGATCAGGTGTCAAACTCAGCAAAAACTGCAAAAACAAATAAAGAGGATGATGATTCTCATTCCACAACTTCAAGTGCTACTTGTCTGAGAAGCAGTGGAAGTGGATTTTCCTTTAGATTGGAAGAAAGAGCTGAAAAGCGGAAGGAGTTTTTCTCAAAGTTGGAGGAAAAAATTCTAGCCAAGGAAGCAGAAAAAACTAACCAACAAGCAAAATCAAAGGAAAACCAAGAGGCAGAGATCAAGCTATTGAGGAAGAGTATGACATTCAAAGCCACTCCAATGCCAAGTTTCTATAAGGAACCACCTCCCAAAGTTGAGCTGAAGAAGATACCAACAACACGCGCAAAATCCCCAAAGCTTGGAAGGCATAAAGAACCTGCTACGAACAACAATTCAGGAGAAGATAAGTCTTGCTCCAGTCCACGTGGGAAACAACAGCAGAATGATTCAAACAAGGTTAAGGGTCATAATAAAGATATGGCTTCAAAGAAACCAATCCGGAAAACCCAACCCAAGCTGAAGTCTCAGGAAAATGTAACCACAGAAAACAAAGAAGAATCCCAAGATCCACATGATGTTAACAATTCTGAATGCAAAAATGACACGGAGTTAAAATCTGAAACAGATCATGCACTGCTTCTAAATTCAACTACACCCGAGCTTGTGTCATATGAGGTTACTGTTGGAGTGTAG 1323 0.4097 MESENGVAVEEEKRVIGVTTKVENVKKEVEKDCNGAEIQTKNEVSKPTVEKAKGSISAGDKIAVEASKTSSANKNSKGATTKETGGRASVASKNNKYAKDKSILKGPSSISQKQRPSLSQSLSFPAKSDGEDAMQKSIDGYLVKPKVRNIQGNGIRGEAPSSSFKQVHKLRSQLTGKNQHWHACFVYQFGRSTTVTAVNKSQTSEASLSVDQVSNSAKTAKTNKEDDDSHSTTSSATCLRSSGSGFSFRLEERAEKRKEFFSKLEEKILAKEAEKTNQQAKSKENQEAEIKLLRKSMTFKATPMPSFYKEPPPKVELKKIPTTRAKSPKLGRHKEPATNNNSGEDKSCSSPRGKQQQNDSNKVKGHNKDMASKKPIRKTQPKLKSQENVTTENKEESQDPHDVNNSECKNDTELKSETDHALLLNSTTPELVSYEVTVGV 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03288 440 MobiDBLite consensus disorder prediction 105 126 - -
Pumo5g03288 440 Pfam Targeting protein for Xklp2 (TPX2) domain 246 315 IPR027329 -
Pumo5g03288 440 PANTHER PROTEIN WVD2-LIKE 4 84 416 IPR044833 GO:0008017
Pumo5g03288 440 MobiDBLite consensus disorder prediction 202 219 - -
Pumo5g03288 440 MobiDBLite consensus disorder prediction 388 414 - -
Pumo5g03288 440 MobiDBLite consensus disorder prediction 312 333 - -
Pumo5g03288 440 MobiDBLite consensus disorder prediction 40 133 - -
Pumo5g03288 440 MobiDBLite consensus disorder prediction 303 414 - -
Pumo5g03288 440 MobiDBLite consensus disorder prediction 64 91 - -
Pumo5g03288 440 MobiDBLite consensus disorder prediction 334 358 - -
Pumo5g03288 440 MobiDBLite consensus disorder prediction 359 376 - -
Pumo5g03288 440 MobiDBLite consensus disorder prediction 202 240 - -
Pumo5g03288 440 Coils Coil 261 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03288 Pumo-Chr5 82091636 82094271 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03288 - - gmx:100794426 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03288 5 82091636 82094271 Pumo3g02977 3 53218669 53219483 PCT