Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03250 ATGGAAGAGACCAAATCCAGGTTCAACAGGATTTGCGTCTTCTGTGGGAGCAGTTCAGGGAAGAAACCTACATATCAAGAAGCTGCTGTTGAACTTGGCAGGGAGCTGGTGGAAAGAAGGATTGATTTGGTCTATGGAGGTGGTAGCGTGGGGCTGATGGGTCTCGTTTCTCAGGCAGTTCATGATGGTGGGCGCCATGTTCTAGGGTTTGTTCTCACACACTCCCATTCTCTCTTTTATATGTTGCAAATGCAGATAACAGGTGATCCTATTGGGGAAGTGAGAGCTGTATCTAACATGCACCAAAGGAAAGCCGAGATGGCCCGTCAAGCCGATGCCTTTATTGCCCTCCCTGGAGGATATGGAACCCTTGAAGAATTGCTGGAAGTCATTACATGGGCGCAGCTTGGGATCCACAGCAAACCCGTGGGCCTGTTGAATGTGGATGGATTTTACAATTCCTTGTTGTCTTTCATTGACAAGGCCGTTGATGAAGGCTTTATATCCCCTACGGCACGTCGCATTATCGTGTCAGCACCCACAGCCAAACAATTGATGCTAGAACTTGAGGAACATGTTCCTGAGCAAGATGAGTTTGCGTCCAAGTTGGTGTGGGAAGAAAGACTGAATTACGTGACTGAATCAGAAGTTGCCATGTGA 660 0.4788 MEETKSRFNRICVFCGSSSGKKPTYQEAAVELGRELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGFVLTHSHSLFYMLQMQITGDPIGEVRAVSNMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHSKPVGLLNVDGFYNSLLSFIDKAVDEGFISPTARRIIVSAPTAKQLMLELEEHVPEQDEFASKLVWEERLNYVTESEVAM 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03250 219 SUPERFAMILY MCP/YpsA-like 7 191 - -
Pumo5g03250 219 FunFam CASP-like protein 1 191 - -
Pumo5g03250 219 Pfam Possible lysine decarboxylase 53 186 IPR031100 -
Pumo5g03250 219 Gene3D - 1 191 - -
Pumo5g03250 219 NCBIfam Rossman fold protein, TIGR00730 family 10 190 IPR005269 GO:0009691|GO:0016787
Pumo5g03250 219 PANTHER LOG FAMILY PROTEIN YJL055W 3 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03250 Pumo-Chr5 81522218 81526941 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03250 K22522 - gmx:100792663 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03250 5 81522218 81526941 Pumo5g03250 5 81522218 81526941 ECH