Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03248 ATGCGTACTTGTGGGTACTTTGCATCCAGAAATACTTCGCTGCAAAGGGAACAGCAGAGGCGGAGGGAAGTCGCGACGGCAATGAGAGGCCGTGCACTCAAATGGTGGCTCTGGTGGTCACAGCGCCATCCACAGTCGACTTGGGGACCCTTCCTTGTTGAATTTCTTTGGCGTTTTAAGGTTGAATATCGCGATATTTTGCCCATTTCAGACGATGGAATAATGGAAGAGGAGCCGTGCCAAACAATTTCCCCCCCACACCATCCAACTTCCCCACCCACTGCTGCCACCAAATCTCAAAGTGAACTTCCGTTAGTTGGGAACACAGCACCAGATTTTGAAGCAGAGGCTGTTTTTGATCAGGAGTTTATCAAGGTCAAACTATCCGAATATATTGGAAAAAAATATGTTGTCCTCTTTTTCTACCCATTGGACTTCACATTCGTTTGTCCGACAGAAATCACTGCTTTCAGCGACCGGTATTCAGAGTTTGAGGAACTAAATACAGAGATATTGGCTGTTTCAGTTGACAGTGTGTTTTCGCACCTTGCATGGGTTCAAACTGATAGAAAGTCAGGTGGTCTTGGCGACTTGAAGTATCCTTTGATTTCTGACATCACCAAATCCATCTCAAAATCTTATGGTGTTCTCATTTCTGATCAGGGGATTGCGTTGAGAGGATTGTTCATTATTGACAAGGAAGGGGTTATTCAGCATTCTACCATTAACAACCTGGCAATTGGTAGAAGTGTTGATGAGACAAAGAGAACACTCCAGGCTTTGCAGTATGTGCAGGAGAACCCCGATGAAGTTTGCCCAGCTGGGTGGAAGCCTGGTGAGAAGTCCATGAAACCAGACCCTAAACTTAGCAAAGACTACTTTGCTGCAGTGTAG 894 0.4564 MRTCGYFASRNTSLQREQQRRREVATAMRGRALKWWLWWSQRHPQSTWGPFLVEFLWRFKVEYRDILPISDDGIMEEEPCQTISPPHHPTSPPTAATKSQSELPLVGNTAPDFEAEAVFDQEFIKVKLSEYIGKKYVVLFFYPLDFTFVCPTEITAFSDRYSEFEELNTEILAVSVDSVFSHLAWVQTDRKSGGLGDLKYPLISDITKSISKSYGVLISDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKDYFAAV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03248 297 CDD PRX_Typ2cys 106 279 - -
Pumo5g03248 297 PANTHER THIOREDOXIN PEROXIDASE 99 296 - -
Pumo5g03248 297 MobiDBLite consensus disorder prediction 78 101 - -
Pumo5g03248 297 Pfam C-terminal domain of 1-Cys peroxiredoxin 260 294 IPR019479 GO:0051920
Pumo5g03248 297 SUPERFAMILY Thioredoxin-like 104 295 IPR036249 -
Pumo5g03248 297 ProSiteProfiles Thioredoxin domain profile. 104 263 IPR013766 -
Pumo5g03248 297 FunFam 2-Cys peroxiredoxin BAS1, chloroplastic 98 297 - -
Pumo5g03248 297 Gene3D Glutaredoxin 98 297 - -
Pumo5g03248 297 Pfam AhpC/TSA family 106 239 IPR000866 GO:0016209|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03248 Pumo-Chr5 81509335 81512424 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03248 K03386 - tcc:18598370 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03248 5 81509335 81512424 Pumo5g03248 5 81509335 81512424 ECH