Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03214 ATGTTTTCAGCTAGCATTTTGCTACAGATTCTGGCATGTGCAATATATAACAATTGGTGGCCAATGTTATCAGCTCTGATGTATGTGCTGGTACCCATGCCTTGCTTATTCTTTGGAGGTGGATCCACTCAATTTCTTATGAGCCGTGATGGTGGTGGTTGGATAGATGCTGCAAAATTTTTGACTGGAGCATCAGCAGTTGGGAGCATAGCCATTCCTATAGTCCTCAAGCACGCTCATATGATTGAGACAGGCGCAATGCTCATTGAGCTTGTATCGTTCTTCATATTTATATGTACTGTTTTATGTTTCCACCAAGCCAACCTTGATGATGATTGGTAA 342 0.4181 MFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWIDAAKFLTGASAVGSIAIPIVLKHAHMIETGAMLIELVSFFIFICTVLCFHQANLDDDW 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03214 113 PANTHER LEPTIN RECEPTOR-RELATED 1 112 IPR007262 -
Pumo5g03214 113 Pfam Vacuolar protein sorting 55 2 107 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03214 Pumo-Chr5 81127855 81131286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03214 1 104 EF-hand Containing Proteins AT1G32410 56.731 5.01e-39 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03214 - - gmx:100800586 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03214 5 81127855 81131286 Pumo5g03214 5 81127855 81131286 ECH