Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03210 ATGGCTTATTTGTATAGAAGCAAGGACTTTATGACGTGGGTTCAGGCCAAACACCCAATCCATTCCAAGGGTGAAACCGGTATGTGGGAGTGTCCTGATTTTTATCCGGTTTCGGTTAGAGGCAATGAGGGGTTGGACACGTCCATGGTGGGGAATCATGTGAAGCATGTGTTGAAGAATAGCCTTGACACGACTAGGTTCGAGTACTATACCGTGGGAACGTATTTTGAGGATAAGGATAAATATGTTCCAGATAACACTTCAGTGGATGGTTGGGATGGACTTAGGTATGACTATGGTAATTTCTATGCTTCCAAGTCCTTTTTTGACCCTAGCAAGAATCGAAGGATCTTGTGGGGTTGGGCAAACGAGTCTGATACCAAGGAAGATGATGTTCGCAAAGGATGGGCAGGAATTCAGGCGATTCCCCGAACTGTGTGGCTCGATTCTACTGGGAGACAATTGGTGCAATGGCCTGTTGAAGAATTAAATAGTCTCAGAGGGAAAGAAGTTAACATGAACAATCAAAATCTTAAGAAGGGAGATTATGTTGAAGTAAAAGGAATTACTGCTGCCCAGGCTGATGTGGAAGTTACATTCTCATTTGCAAGCTTGGACAAGGCAGAGGCATATGATCCTAAGTGGGTAAACGCGCAGGACCTTTGTGCCCAAAAGGGTTCAAAATTTCAAGGTGGCGTTGGACCATTTGGGCTTCTCACATTAGCTTCTCAAAATCTGGAGGAGTTTACTCCTGTGTTTTTTAGAATTTTCAAAGGTCCAAATAAGAATGTGGTTCTCTTATGCTCCGATGCGAGAAGTTCCTCTTTGAAGAGTAATTTGTACAAGCCATCATTTGCTGGCTTTGTAGACGTGGATTTGGCCACTAATAAGAAACTTTCTCTTAGGAGTTTGATTGATCACTCAGTAGTGGAGAGTTTTGGAGAAGGAGGGAAGACTAACATTTTGTCTCGGGTTTATCCACAGTTAGCCTGTGTCGAATCAAGCTCACTTATTTGTGTTCAACAACGGTACCGAACCAATCACAGTGGAAAATCTCAAAGCATGGAACATGAAATCTGTTGA 1083 0.4303 MAYLYRSKDFMTWVQAKHPIHSKGETGMWECPDFYPVSVRGNEGLDTSMVGNHVKHVLKNSLDTTRFEYYTVGTYFEDKDKYVPDNTSVDGWDGLRYDYGNFYASKSFFDPSKNRRILWGWANESDTKEDDVRKGWAGIQAIPRTVWLDSTGRQLVQWPVEELNSLRGKEVNMNNQNLKKGDYVEVKGITAAQADVEVTFSFASLDKAEAYDPKWVNAQDLCAQKGSKFQGGVGPFGLLTLASQNLEEFTPVFFRIFKGPNKNVVLLCSDARSSSLKSNLYKPSFAGFVDVDLATNKKLSLRSLIDHSVVESFGEGGKTNILSRVYPQLACVESSSLICVQQRYRTNHSGKSQSMEHEIC 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03210 360 SUPERFAMILY Concanavalin A-like lectins/glucanases 159 329 IPR013320 -
Pumo5g03210 360 SMART glyco_32 1 317 IPR001362 GO:0004553|GO:0005975
Pumo5g03210 360 Pfam Glycosyl hydrolases family 32 N-terminal domain 2 159 IPR013148 -
Pumo5g03210 360 Gene3D - 173 350 - -
Pumo5g03210 360 Pfam Glycosyl hydrolases family 32 C terminal 162 333 IPR013189 -
Pumo5g03210 360 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 343 - -
Pumo5g03210 360 SUPERFAMILY Arabinanase/levansucrase/invertase 2 160 IPR023296 -
Pumo5g03210 360 Gene3D Glycosyl hydrolase domain; family 43 1 172 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03210 Pumo-Chr5 81053216 81056529 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03210 1 337 Glycoside Hydrolase AT2G36190 63.610 3.94e-153 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03210 K01193 - gmx:100777418 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03210 5 81053216 81056529 Pumo5g03210 5 81053216 81056529 ECH