Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03205 ATGACGGAAGTGCTTCAGTTGCCTTCATCCTCAAGCTGTTCTCGTAGGCCATGTGTTGGTCTCACACCCAATGATGGGTCGCACCCAAGTCCCCTTATTAACGCTCCCACTGTGGAACAAGAAGAAAGGGTGGAAATTGAAGAAGAAGAAGAAGAGAAAGAAAGGGAAAGAGAGAGGGATCAGCTTTCTATTTTGACCCTTTTGATTGCTACGTTCAGGAAATCTTTGATTGGGTGCAGCACTACCACTACAACTTCTTCTTCCATGGAGATTGGGTGGCCTTCCAATGTGAGACACGTGGCACATGTCACCTTCGATCGCTTCCATGGCTTTCTTGGTCTGCCTGTTGAGTTTGAACCCGAAGTTCCCAGGAGACCTCCCAGTGCCAGTGCAAATGTTTTTGGAGTTTCAACAGAATCTATGCAGCTTTCTTTTGATGCTAGAGGAAATAGTGTACCTACAATACTGCTGTTAATGCAAAGACATTTGTATGCACAAGGAGGCCTGCAGGCTGAAGGAATCTTCAGAATTAATGCTGAAAATGGTCAAGAGGAGTTTGTGAGGGAACAATTAAACAGAGGAGTAGTACCAGATGGCATTGATGTGCACTGCTTGGCAGGTCTCATAAAGGCTTGGTTTAGAGAACTACCAACTGGGGTATTGGACCCTCTTTCGCCTGAGCAGGTGATGCAATCCCAGTCAGAAGAAGAATGTGCTCAGCTTGTTAGGCTTCTTCCTCCAACAGAAGCTGCTTTGCTAGATTGGGCAATAAACTTAATGGCAGATGTTGCTCAAATGGAAAACTTGAACAAGATGAATGCACGTAATATTGCAATGGTTTTTGCACCAAACATGACTCAAATGGCAGATCCTTTGACTGCTTTGATGTATGCAGTACAAGTCATGAATTTTCTCAAGACTCTTGTCGTGAAGACACTGAGAGAAAGAGAGGAGTCTATTGTAAAATCCAATCCTGTTCCAGACCTTAATTCTTTTGACGATGATGGGAACCATAACAATTCAGAAATGCTTGACAAGGATGGCAGTGAAAATGGAAATGATTGTAGCGATGACGATGAAGATACAATGTTTGTCACTGCAGAGCCTTCTCAACAAAGCCCTAGTCATCTTACTGAAGATGGCTGTGAAACCGAAACCGAAACTGAATCCAAAAGTTTGCCAACATCTACTGAAAATTTCATTTCTAGTGGAAATAGGTTACTGGTTGACAGCTGTCCTTACAATCTTGTGTCTCAAATTTGCTCTTTGGCGATTGGACTTCAAGACTGCGGCCTCACTACTGGGCAGACAAAGGGGGATCAAGCAAAAATTTGTAGGAGCAAAAGCCTTCAGTTGAGTACTTATGATACAGACAAGTGTTCCAGAAAGTTGATTGAGCTTCCGGTAGCAGGAGCTGCAGAGAAGAACCTGGGAACCGCAATAATTGGGTGCATAAATTCGAGAACGGAGCTGGCCGAAGCTTGGCGTTGA 1491 0.44 MTEVLQLPSSSSCSRRPCVGLTPNDGSHPSPLINAPTVEQEERVEIEEEEEEKERERERDQLSILTLLIATFRKSLIGCSTTTTTSSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPRRPPSASANVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENGQEEFVREQLNRGVVPDGIDVHCLAGLIKAWFRELPTGVLDPLSPEQVMQSQSEEECAQLVRLLPPTEAALLDWAINLMADVAQMENLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLVVKTLREREESIVKSNPVPDLNSFDDDGNHNNSEMLDKDGSENGNDCSDDDEDTMFVTAEPSQQSPSHLTEDGCETETETESKSLPTSTENFISSGNRLLVDSCPYNLVSQICSLAIGLQDCGLTTGQTKGDQAKICRSKSLQLSTYDTDKCSRKLIELPVAGAAEKNLGTAIIGCINSRTELAEAWR 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03205 496 MobiDBLite consensus disorder prediction 319 397 - -
Pumo5g03205 496 CDD RhoGAP 153 308 - -
Pumo5g03205 496 CDD CRIB 89 129 - -
Pumo5g03205 496 Gene3D CRIB domain 85 120 IPR036936 -
Pumo5g03205 496 SUPERFAMILY GTPase activation domain, GAP 131 309 IPR008936 -
Pumo5g03205 496 ProSiteProfiles CRIB domain profile. 91 104 IPR000095 -
Pumo5g03205 496 SMART PBD_5 91 125 IPR000095 -
Pumo5g03205 496 Pfam RhoGAP domain 153 287 IPR000198 GO:0007165
Pumo5g03205 496 PANTHER MKIAA1688 PROTEIN 1 384 IPR044785 GO:0005096
Pumo5g03205 496 Pfam P21-Rho-binding domain 90 116 IPR000095 -
Pumo5g03205 496 MobiDBLite consensus disorder prediction 1 58 - -
Pumo5g03205 496 MobiDBLite consensus disorder prediction 365 379 - -
Pumo5g03205 496 Coils Coil 37 63 - -
Pumo5g03205 496 Gene3D Rho GTPase activation protein 124 322 IPR008936 -
Pumo5g03205 496 ProSiteProfiles Rho GTPase-activating proteins domain profile. 136 321 IPR000198 GO:0007165
Pumo5g03205 496 FunFam Rho GTPase-activating protein 5 121 314 - -
Pumo5g03205 496 MobiDBLite consensus disorder prediction 1 18 - -
Pumo5g03205 496 SMART RhoGAP_3 150 313 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03205 Pumo-Chr5 81000101 81005045 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03205 - - gmx:100783118 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03205 5 81000101 81005045 Pumo5g03205 5 81000101 81005045 ECH