Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03200 ATGTCGGGGAGGAGAAAGAGGAAGTTGAAATTGTTAAGCGACACAATCACAGATAATAGAAGAGCAGTTGCTGAGGTGAAAAGTGAAAACTTGGAGCTGCAATCCTGGGCTGATCTCCCTGCTGAACTCTTAGAATTGATCTTGTCGCGATTGATTCTAGCGGATAACATCCGTGCTTCTGCTGTTTGCAAGAGATGGCATTCTGTTGCCAGTGATGTACGTGTAGTAAACCAATCACCATGGCTTATGTATTTTCCAAAATTCGGTGACTGTTATGAATTCTACGACCCTGTGCAGCGTAAGACACACACCTTCGAGTTGCCAGAGTTGAGTGGATCTAGAGTTTGTTATACAAAAGATGGTTGGTTATTGCTATACCGGCCCAGAACTCACCGAGTATTCTTCTTTAATCCCTTTACTCGAGAGCTGATCAAACTCCCAAGATTTGAGATGACATACCAGATTGTTGCCTTCTCTTGTGCTCCAACATCACCTGGCTGTGTTCTGTTTACTGTTAAGCATGTTAGTCCTACTGTTGTAGCTATTAGCACTTGTTATCCTGGGGCAACAGAATGGACCACTGTTAATTACCAAAACCGCTTGCCCTTTGTCAGTAGCATTTGGAATAAGCTTGTGTTTTGTAATGGGCTATTTTATTGTCTGAGCCTCACAGGTTGGCTTGGGGTGTTTGACCCAGTTGAATGTTCTTGGAGTGTTCTGGCGGTACCTCCGCCCAAATGCCCCGAGAACTTTTTTGCCAAAAACTGGTGGAAGGGAAAATTTATGACAGAGCATGAAGGAGATATATTAGTAATTTATACATGCTGTAGTGAAAACCCCATTATTTTTAAGTTAGATCAGACAGTAATGAAATGGGAAGAGATGACAACACTAGATGGAGTAACTCTTTTTGCTAGTTTTTTGTCATCTCATTCAAGGACTGACCTCATTGGAATAATGAGGAACAGTGTCTACTTCTCCAAAGTTCGTTTCTATGGAAAGCGCTGCATATCATTCTCTCTTGATGACTGTAGATACTATCCCCGTAAACAGTGTCATGACTGGGGAGAACAAGACCCTTTTGAGAACATCTGGATTGAGCCACCAAAGGACTTTTCTGCTTGCATGTGA 1131 0.4235 MSGRRKRKLKLLSDTITDNRRAVAEVKSENLELQSWADLPAELLELILSRLILADNIRASAVCKRWHSVASDVRVVNQSPWLMYFPKFGDCYEFYDPVQRKTHTFELPELSGSRVCYTKDGWLLLYRPRTHRVFFFNPFTRELIKLPRFEMTYQIVAFSCAPTSPGCVLFTVKHVSPTVVAISTCYPGATEWTTVNYQNRLPFVSSIWNKLVFCNGLFYCLSLTGWLGVFDPVECSWSVLAVPPPKCPENFFAKNWWKGKFMTEHEGDILVIYTCCSENPIIFKLDQTVMKWEEMTTLDGVTLFASFLSSHSRTDLIGIMRNSVYFSKVRFYGKRCISFSLDDCRYYPRKQCHDWGEQDPFENIWIEPPKDFSACM 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03200 376 Gene3D - 35 75 - -
Pumo5g03200 376 Pfam F-box-like 36 72 IPR001810 GO:0005515
Pumo5g03200 376 PANTHER OS09G0392200 PROTEIN 24 370 IPR044619 -
Pumo5g03200 376 SUPERFAMILY F-box domain 31 101 IPR036047 GO:0005515
Pumo5g03200 376 CDD F-box_SF 37 71 - -
Pumo5g03200 376 ProSiteProfiles F-box domain profile. 33 84 IPR001810 GO:0005515
Pumo5g03200 376 SMART fbox_2 39 79 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03200 Pumo-Chr5 80962380 80966371 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03200 - - gmx:100796538 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03200 5 80962380 80966371 Pumo5g03200 5 80962380 80966371 ECH