Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03198 ATGGGCTGCGTCTCCTCTAAACACGTGAAGAAAGATCTGAAGCAAGAAGAAGTCACTGTCACCAATGGCGGCGGTTACGTGAACCACGTCGTATCCCTCACTTCCTCCACCTATGGAGCACTAATGTTGGACAAGGAGAAGGACCAACTTCAACCCACCGTCGAAGAATCCAAAACTGCCAAAACTTCCCCTCCTCGGAATCGCGAAGAACCCGAAGTTATCAACGCTTGGGAACTCATGGAGGGTCTCGAAGAGGGAGTGCCCATTTCAAAGAAAAGCCCCAAGCCCACACCTTTCCTTCGAGGCTTCATCGCCACCGACCCCAAAACCAAAACCCCTTTGAAATTCCTCAACCAATGGTCCCCCAAGAGTCTCAGGAAGTTCACAGGGAAGGAGAACAAAGTTCAACTTCAACCCAGTGCCGGTGTAAGACGCTTGGATTACAATTTTAGCCCAAAGGGTATTCTCAAACCCTCCAATTTTTCTTCTCCGATTCGTGCTCGAAGGAACAGTTTCGGGAGTGACACGAAGCGGAGGAGTCCTAGTCCTCTGTTTGATCCAGAGCTTCTCGCCTCTTACGAAAAGGAACTCTCCGAAGAGGAAGAGCAGATCAAGAGAATGGTGTGGGCCACCCCCAAAACCCGACGAGTCAGAAAATCTTTGGATTCACAAACTCTTATTAACACGTTTGAGGAAAAATTGCCCCCTGGAGGGGAAAATTGCGTTGTGATTTACACCACCACGCTGCGGGGAATCAGAAAGACGTTTGAGGAGTGCAATAAGGTTCGGTCCATTATTGAGTCCTATTGTGTGCACGTGGTGGAGCGTGACGTGTCAATGGATTCGGGGTTAAAGGAGGAGTTGCGGAAGCTGATGGGGACCAAGCAAGTTAAGGTTCCGCTTGTGTTCGTTAAGGGAAGGTTTGTTGGAGGGGCTGAGGAAATTGTGAAGTTGGAAGAAGAGGGAAAATTGGGTGTTCTCTTTGAGGGGATTCCTCCCAAGGCTTTGGGTGAGTGTGAAGGGTGTGGTGGTTTGAGGTTTGTGATGTGCGTGGAGTGTAATGGAAGTTGCAAGGTTTTGGATGAGGATCGCAAGAAGACTGTGAGGTGTGGCCAGTGTAATGAGAATGGATTGATTCAATGTCCTATGTGTCGTTAA 1158 0.4905 MGCVSSKHVKKDLKQEEVTVTNGGGYVNHVVSLTSSTYGALMLDKEKDQLQPTVEESKTAKTSPPRNREEPEVINAWELMEGLEEGVPISKKSPKPTPFLRGFIATDPKTKTPLKFLNQWSPKSLRKFTGKENKVQLQPSAGVRRLDYNFSPKGILKPSNFSSPIRARRNSFGSDTKRRSPSPLFDPELLASYEKELSEEEEQIKRMVWATPKTRRVRKSLDSQTLINTFEEKLPPGGENCVVIYTTTLRGIRKTFEECNKVRSIIESYCVHVVERDVSMDSGLKEELRKLMGTKQVKVPLVFVKGRFVGGAEEIVKLEEEGKLGVLFEGIPPKALGECEGCGGLRFVMCVECNGSCKVLDEDRKKTVRCGQCNENGLIQCPMCR 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03198 385 CDD GRX_GRX_like 242 381 - -
Pumo5g03198 385 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 27 384 - -
Pumo5g03198 385 Gene3D Glutaredoxin 238 329 - -
Pumo5g03198 385 ProSiteProfiles Glutaredoxin domain profile. 230 335 - -
Pumo5g03198 385 MobiDBLite consensus disorder prediction 46 69 - -
Pumo5g03198 385 MobiDBLite consensus disorder prediction 166 185 - -
Pumo5g03198 385 Coils Coil 190 210 - -
Pumo5g03198 385 Pfam Glutaredoxin 242 309 IPR002109 -
Pumo5g03198 385 SUPERFAMILY Thioredoxin-like 237 329 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03198 Pumo-Chr5 80925758 80927257 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03198 K17479 - gmx:100781497 669.077