Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03194 ATGTTTCCTGTTTGCAACCCATCTTCTCTTTCTCTGCAACCGGGTGTGGTGGTACCGATTCCAGGAAAACCTACTAAACACTCTTCGACTCTCTCCGTCACCCACTCCGCCTCTCCCGGCGAGAGAATCAGCACGCGCCGAAGAACCATTTCACCCTTCGAATCCCGAATCTCGCTCATTTTCGCCCTCGCTTCTCAAGCCAACACTCTCTCCCAGCGACTTCTAGCGGACGTGGCTGCCGAGACTGCGAAATACGTGTTTCCGAAGAGATTTGAAAGCCGCAATCTTGAGGAGGCGTTGATGAGTGTTCCGGACCTTGAGACTGTCGAGTTCAAAGTTCTGAGTAGAAGGGACCAGTATGAGATTAGGGAAGTCGAGCCTTACTTTGTGGCAGAGACAACAATGCCTGGGAAGAGTGGGTTTGATTTCAATGGTGCTTCTCGGTCCTTTAATGTTCTAGCTGAGTACCTTTTCGGTAAGAATACAACTAAGGAGAAAATGGAGATGACTACACCCGTTTTCACAAGTAAGAATCAATCTGATGGGGTTAAAATGGATATGACAACTCCTGTGTTAACAACAAAGATGGAAGATCAAGATAAGTGGAAAATGTCTTTTGTCATGCCATCAAAGTATGGTGCTAACTTGCCACTGCCTAAAGATTCCTCTGTGAGTATTAAAGAGGTGCCCAGAAAAATAGTTGCTGTAGTTTCCTTTTCAGGTTTTGTAAATGATGAAGAAATTAAGCAGCGTGAACTGAAACTACGAGAAGCTTTAAGAAGTGACAGTCAGTTTAAAATTAAAGAGGGAACTTCAGTAGAAGTTGCACAGTATAATCCACCATTTACTCTTCCATTTCAACGCCGTAATGAGATTGCATTGGAGGTGGAATGGAAAAATAAGTAG 906 0.4437 MFPVCNPSSLSLQPGVVVPIPGKPTKHSSTLSVTHSASPGERISTRRRTISPFESRISLIFALASQANTLSQRLLADVAAETAKYVFPKRFESRNLEEALMSVPDLETVEFKVLSRRDQYEIREVEPYFVAETTMPGKSGFDFNGASRSFNVLAEYLFGKNTTKEKMEMTTPVFTSKNQSDGVKMDMTTPVLTTKMEDQDKWKMSFVMPSKYGANLPLPKDSSVSIKEVPRKIVAVVSFSGFVNDEEIKQRELKLREALRSDSQFKIKEGTSVEVAQYNPPFTLPFQRRNEIALEVEWKNK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03194 301 Gene3D Regulatory factor, effector binding domain 105 179 IPR011256 -
Pumo5g03194 301 Gene3D Regulatory factor, effector binding domain 180 301 IPR011256 -
Pumo5g03194 301 MobiDBLite consensus disorder prediction 23 43 - -
Pumo5g03194 301 Pfam SOUL heme-binding protein 106 294 IPR006917 -
Pumo5g03194 301 MobiDBLite consensus disorder prediction 25 43 - -
Pumo5g03194 301 SUPERFAMILY Probable bacterial effector-binding domain 177 296 IPR011256 -
Pumo5g03194 301 PANTHER HEME-BINDING PROTEIN-RELATED 73 175 IPR006917 -
Pumo5g03194 301 SUPERFAMILY Probable bacterial effector-binding domain 101 176 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03194 Pumo-Chr5 80880178 80883261 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03194 - - gmx:100797412 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03194 5 80880178 80883261 Pumo5g03194 5 80880178 80883261 ECH