Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03184 ATGGCTACCTGTTATACACCTTCGAATGCTAGAAATTCAGCGGGGGTGCTAGCTGTTGTTGGAGGGAGAACAATTTCTGAGAATCACGGTAACAGATCGTACTTTTTGAAAATTCAAGAGAGCAAGACCGTGTTTGGCAGCAATCGAAAGTGTGGTTCATTTCATGTGAAGTGCTCTGCGAATTCCCACAGTATCAGTCGCAAGGATCCTTTTCTGGATCTACACCCTGAGGTTTCAATGCTTAGAGGAGAAGGAGGGAGTGCATTGAATAACCCTAGACCTAGAAAGGATGTATCGGGAGGAAGCGTGGCTGAAAGTTTGGAAGCCACGACGACTCCGAGTAACTACAATGAAGCTAAGATCAAAGTCATTGGTGTGGGTGGAGGTGGGTCAAATGCGGTCAACCGTATGATAGAGAGCTCCATGAATGGTGTGGAGTTCTGGATTGTTAATACTGATATTCAAGCCATGAGGATGTCGCCGGTCATTCCTCAGAACCGGTTGCAAATCGGTCAGGAGCTTACACGAGGACTTGGTGCCGGTGGTAACCCTGAGATTGGCATGAATGCTGCCAAGGAAAGCAAGGAATCGATACAGGAGGCAGTTTATGGAGCTGATATGGTCTTTGTTACAGCTGGAATGGGTGGAGGAACTGGCACTGGTGGAGCTCCAGTTATTGCTGGTATCACAAAGTCAATGGGTATACTGACTGTTGGTATTGTCACAACCCCTTTTTCATTTGAAGGAAGAAGAAGGGCAGTTCAAGCACAAGAAGGAATTGCAGCCTTAAGAGATAATGTTGATACGCTGATAGTTATTCCAAATGACAAACTGCTGACTGCAGTTTCTCAATCTACCCCTGTAACTGAAGCATTCAATCTGGCTGATGATATTCTTCGACAAGGTGTTCGTGGTATATCTGATATTATTACGATACCAGGACTGGTGAACGTAGACTTTGCTGATGTTCGAGCAATAATGGCCAATGCAGGTTCTTCACTTATGGGGATAGGAACTGCAACTGGGAAAACAAGGGCAAGAGATGCTGCATTAAACGCTATTCAGTCACCTTTACTAGATATTGGTATAGAAAGGGCTACTGGAATTGTGTGGAACATAACCGGTGGAAGTGATTTGACCTTGTTTGAGGTAAATGCTGCAGCAGAAGTTATATATGACCTTGTGGACCCCACTGCTAATTTAATATTTGGAGCAGTAATAGATCCATCGCTCAGTGGTCAAGTAAGCATAACATTAATTGCAACTGGATTCAAGCGTCAAGAAGAAAGTGAAGGGAGGCCCATACAGGCCAGTCAACTTACACAAGGAGATACTATTGGTATCAATCGGCGATCTTCCTCTTTCACTGATGGTAGTTTTGTTGAGATCCCCGAATTCTTAAAGAAAAAGGGACGCTCACGTTATCCAAGAGCTTAA 1437 0.444 MATCYTPSNARNSAGVLAVVGGRTISENHGNRSYFLKIQESKTVFGSNRKCGSFHVKCSANSHSISRKDPFLDLHPEVSMLRGEGGSALNNPRPRKDVSGGSVAESLEATTTPSNYNEAKIKVIGVGGGGSNAVNRMIESSMNGVEFWIVNTDIQAMRMSPVIPQNRLQIGQELTRGLGAGGNPEIGMNAAKESKESIQEAVYGADMVFVTAGMGGGTGTGGAPVIAGITKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEESEGRPIQASQLTQGDTIGINRRSSSFTDGSFVEIPEFLKKKGRSRYPRA 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03184 478 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 55 436 IPR045061 GO:0003924|GO:0005525
Pumo5g03184 478 PRINTS Cell division protein FtsZ signature 207 227 IPR003008 GO:0005525
Pumo5g03184 478 PRINTS Cell division protein FtsZ signature 235 256 IPR003008 GO:0005525
Pumo5g03184 478 PRINTS Cell division protein FtsZ signature 298 320 IPR003008 GO:0005525
Pumo5g03184 478 PRINTS Cell division protein FtsZ signature 321 342 IPR003008 GO:0005525
Pumo5g03184 478 Pfam FtsZ family, C-terminal domain 331 425 IPR024757 -
Pumo5g03184 478 Hamap Cell division protein FtsZ [ftsZ]. 116 447 IPR000158 GO:0003924|GO:0005525
Pumo5g03184 478 ProSitePatterns FtsZ protein signature 2. 206 227 IPR020805 GO:0005525
Pumo5g03184 478 MobiDBLite consensus disorder prediction 82 103 - -
Pumo5g03184 478 NCBIfam cell division protein FtsZ 112 435 IPR000158 GO:0003924|GO:0005525
Pumo5g03184 478 SMART Tubulin_C_4 316 433 IPR018316 -
Pumo5g03184 478 Gene3D - 330 439 IPR037103 -
Pumo5g03184 478 SUPERFAMILY Tubulin nucleotide-binding domain-like 119 317 IPR036525 -
Pumo5g03184 478 Gene3D Tubulin/FtsZ, GTPase domain 109 329 IPR036525 -
Pumo5g03184 478 SUPERFAMILY Tubulin C-terminal domain-like 313 427 IPR008280 -
Pumo5g03184 478 FunFam Cell division protein ftsZ, putative 330 438 - -
Pumo5g03184 478 SMART Tubulin_4 120 314 IPR003008 GO:0005525
Pumo5g03184 478 FunFam Cell division protein FtsZ 111 329 - -
Pumo5g03184 478 CDD FtsZ_type1 131 423 IPR000158 GO:0003924|GO:0005525
Pumo5g03184 478 Pfam Tubulin/FtsZ family, GTPase domain 120 281 IPR003008 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03184 Pumo-Chr5 80807869 80814881 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03184 K03531 - gmx:100793382 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03184 5 80807869 80814881 Pumo5g03184 5 80807869 80814881 ECH