Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03182 ATGGAGCACCTTCCTGTTGAAGTGATTGGTAACATATTATCTCTTCTGGGTTCTGCCCGGGATGTTGTGGTTGCCTCTGCAACTTGTAGAAAATGGAGGGAAGCATGGCGCAATCACCTCCACAATCTTTCATTCAACTACTGTGATTTCCCCCTCTATCATGACTTAACCTCTGCTAGGTTGGAAATACTCATCACTCAGACAATCTTCCAAACCAAGGCACTGCAATCCTTGACCATTTTCATGGATGATGAGCACGAGTTCTCGGCTGCCCCGGTCATTGCTTGGCTTATGTATACTAGGGATTCGTTGTGCCAATTGCATTATAATGTGAGGACAACCCCTAGTTTCAATATCATTGAGAAGTGCAGCAGGCAGAGGTTGGAGGTGTTGGCCTTGGCTCACAATTCTATCACGGGTGTTGAGCCTAGTTATTTGAAGTTCCCTTGCTTGAAGTCGCTTTCGTTGAGTTTCGTTAGCATCTCGGCGTTGGATTTGAGCCTTCTGCTTTCTGCGTGCCCGAAGCTGGAAACCTTGGCTATGGTTAGTCCGGAGATTGCAATGTCAGATTCGCAGGCTTCCGTGGAGCTTAGCAGCGTTTCTTTGAAGGTTTTTGACCTTGAATTGTTTAGTTCGGATAAGTTTATATTGGAGGCAGATTTGCTTGAGAAACTTCATTTGAAAGATTGTAGCTTTGAGGATTTTGAGCTGATTGGAAAGGGGACATTGAAGGTGTTGAAAATTGATGATGTGAGTGTTATCCATCTTGATATTGGGGATAGTACAGAGAACCTTGAGATTATAGATGTCTGTAACTTCACAATCATGTGGCCGAAATTTTATCATATGATCTCAAAAGCATCAAAGTTATATAAGCTTCGGCTGTGGGGTGTTGTTTTTGATGATGAGGATGAGGTTGTTGATATAGAGACAATTTCTGTTTGCTTTCCTCAGTTGACGCATTTGTCCTTAAGTTATGATTTAAGAGATGGAGTGCTTCATTATGGCTTGCAGGGTTTGTCTTGTTTGATGAATGTGGTGGTGTTAGAACTTGGGTGGACTGTAATCAGTGATCTTTTCTCAGTATGGGTAGCTGGACTTTTGGAAGGTTGTCCCAATTTGAAAAAAATGGTCATTTATGGTTTTGTTTCAGAGGTCAAAACACATGAAGAGTGCCAAATTCTTGCCAGATTCTCTGAATTCATTATTCAACTTGGAAGAAAATATGGGCACGTAAAGTTTGAGTTTGAATATGACTAG 1260 0.4183 MEHLPVEVIGNILSLLGSARDVVVASATCRKWREAWRNHLHNLSFNYCDFPLYHDLTSARLEILITQTIFQTKALQSLTIFMDDEHEFSAAPVIAWLMYTRDSLCQLHYNVRTTPSFNIIEKCSRQRLEVLALAHNSITGVEPSYLKFPCLKSLSLSFVSISALDLSLLLSACPKLETLAMVSPEIAMSDSQASVELSSVSLKVFDLELFSSDKFILEADLLEKLHLKDCSFEDFELIGKGTLKVLKIDDVSVIHLDIGDSTENLEIIDVCNFTIMWPKFYHMISKASKLYKLRLWGVVFDDEDEVVDIETISVCFPQLTHLSLSYDLRDGVLHYGLQGLSCLMNVVVLELGWTVISDLFSVWVAGLLEGCPNLKKMVIYGFVSEVKTHEECQILARFSEFIIQLGRKYGHVKFEFEYD 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03182 419 Gene3D Ribonuclease Inhibitor 191 394 IPR032675 -
Pumo5g03182 419 PANTHER F-BOX PROTEIN-LIKE 2 379 - -
Pumo5g03182 419 Gene3D - 2 40 - -
Pumo5g03182 419 Pfam F-box-like 2 37 IPR001810 GO:0005515
Pumo5g03182 419 Gene3D Ribonuclease Inhibitor 57 190 IPR032675 -
Pumo5g03182 419 SMART fbox_2 4 45 IPR001810 GO:0005515
Pumo5g03182 419 SUPERFAMILY RNI-like 61 381 - -
Pumo5g03182 419 SUPERFAMILY F-box domain 2 48 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03182 Pumo-Chr5 80797242 80799242 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03182 - - gmx:100792331 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03182 5 80797242 80799242 Pumo5g03182 5 80797242 80799242 ECH