Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03179 ATGGCAAGAATGCCTTTAGAGCCTCTAATAGTGGGGAGAGTCATAGGAGAAGTTCTTGATTCTTTTACCACAAGCATAAAAATGACTGTGAGTTACAACAAGAAGCAAGTCTACAATGGCCATGAGCTCTTCCCTTCCACTATCAACACCAAGCCCAAGGTTGAGATTGAGGGTGATGATATGAGGTCCTTCTTTACACTGATCATGACAGACCCTGATGTTCCTGGCCCTAGTGACCCTTATCTGAGAGAGCACTTGCACTGGATAGTGACAGATATTCCAGGCACAACAGATGCCACATTTGGGAAAGAGTTGGTGAGCTATGAGATCCCAAAGCCTAATATTGGGATCCATAGGTTTGTGTTTGTCCTGTTCAAGCAAAAGCGCAGACAGTGTGTTACTCCACCCACTTCAAGGGATCACTTCAACACACGCAATTTCGCAGCAGAGAATGACCTTGGCCTCCCTGTGGCTGCTGTCTACTTCAATGCACAGAGGGAAACGGCTGCAAGAAGACGCTAG 522 0.4655 MARMPLEPLIVGRVIGEVLDSFTTSIKMTVSYNKKQVYNGHELFPSTINTKPKVEIEGDDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKELVSYEIPKPNIGIHRFVFVLFKQKRRQCVTPPTSRDHFNTRNFAAENDLGLPVAAVYFNAQRETAARRR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03179 173 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 12 168 IPR035810 -
Pumo5g03179 173 SUPERFAMILY PEBP-like 13 167 IPR036610 -
Pumo5g03179 173 CDD PEBP_euk 27 164 IPR035810 -
Pumo5g03179 173 Pfam Phosphatidylethanolamine-binding protein 48 162 IPR008914 -
Pumo5g03179 173 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Pumo5g03179 173 FunFam Terminal flower 1 1 173 - -
Pumo5g03179 173 Gene3D - 2 173 IPR036610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03179 Pumo-Chr5 80768978 80770264 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03179 K06910 - pvu:PHAVU_001G189200g 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03179 5 80768978 80770264 Pumo5g03179 5 80768978 80770264 ECH
Pumo5g03179 5 80768978 80770264 Pumo3g03103 3 56526639 56528031 PCT