Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03176 ATGGGTCTGCGAATGTGTGTGCCAGGGTTCTTGCTTTTGCTAATCATCGGAATCTTCGAATTCGATGCCGTTTATGGTTATATTCGACCACCACGTCGTCAAACACTCTTTATTCCACATGCAGATCAAGACTCATACTCGCCACAACAGGTACACATATCTCAAGTGGGCCTAAACAATATGAGGATATCGTGGATCACAGACAGCCAAACTCCTGCAAAGGTGTCCTATGGTCCATCTCCTTCGGCTAATGCACTCTCTGCCACAGGGACAACCTCTTCGTACCGTTATATCCTCTACGAGTCCGGCGAAATACACGACGTCGTAATTGGTCCGCTCAACCCCAATACTGTCTACTACTACCGTTTGGGTGGCCCACCTCTTCCCAAACATATCAAGTTTGCAGTAATTTCTAGTCAGCGTCCTTGGATGGTCACCCAATACAACCACGAGATCGAGACGTTTTCACTACTTCACAATACAAAATTCACAGCATACAAAGCTAGGTGGCGCATGCCATTTGAAGAAAGTGGATCAAACTCTAACCTCTACTATTCTTTCGATGTGGCTGGCGTTCATGTCATCATGCTTGGCTCATACACTGACTTTGACTCTTCTTCTCCACAATACAAATGGCTTCAAAATGACTTGCAAAAGGTATATAGGGGAACAACTCCTTGGGTTGTGGTGTTGGAATGA 699 0.4549 MGLRMCVPGFLLLLIIGIFEFDAVYGYIRPPRRQTLFIPHADQDSYSPQQVHISQVGLNNMRISWITDSQTPAKVSYGPSPSANALSATGTTSSYRYILYESGEIHDVVIGPLNPNTVYYYRLGGPPLPKHIKFAVISSQRPWMVTQYNHEIETFSLLHNTKFTAYKARWRMPFEESGSNSNLYYSFDVAGVHVIMLGSYTDFDSSSPQYKWLQNDLQKVYRGTTPWVVVLE 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03176 232 PANTHER ACID PHOSPHATASE RELATED 19 124 IPR039331 GO:0003993
Pumo5g03176 232 SUPERFAMILY Purple acid phosphatase, N-terminal domain 37 131 IPR008963 GO:0003993|GO:0046872
Pumo5g03176 232 Gene3D - 47 136 - -
Pumo5g03176 232 SUPERFAMILY Metallo-dependent phosphatases 136 230 IPR029052 -
Pumo5g03176 232 Gene3D - 137 232 IPR029052 -
Pumo5g03176 232 Pfam Purple acid Phosphatase, N-terminal domain 48 125 IPR015914 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03176 Pumo-Chr5 80719636 80722380 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03176 182 230 Miscellaneous Gene Families AT2G03450 46.939 5.01e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03176 K22390 - cit:102630359 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03176 5 80719636 80722380 Pumo5g03176 5 80719636 80722380 ECH