Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03173 ATGTATTCCATCTCATCCTGTCTATCTTCCTCAACCCCATTATATAATAGGCCCTCCATATTCAAAGCGGTGCCTTTCACTCCCAGCAACAAATTGCAACAATCAACAAGTACTCCAACCCAAAACAACAACATGATGGGTAAATGTAGCAAGTCCCTTAGGGCGTTCCCAATCCTCCTACACACCTTATGCTTCCTTTTGTTCCCACAGCCCCTACTTTCTCAAGAGACCAATTTTGTTCGCCAGCCAGCTGGTCAACTCATCATCACACCCCACCAACGCTCCCATTCAGACCCCCAACAGGTGCACATTTCATTGGTGGGGAAAGAGAAGATGAGGGTGTCGTGGGTAACCGAAGACAAGCACGCAGAATCGGTGGTGGAGTATGGAACAAAGGCAGGGGAATACAGCGCAAAAGCAACGGGGGTGCATACCTCGTACCAATATTTTTTCTATAACTCCGGCAAGATCCATAACGTTGTTATTGGGCCGTTGCAGCCCAGTACCACTTACTTCTACAGGTGCGGAGGGTCGGGCCCTGAGTTTTCCTTCAAGACTCCTCCACCCAAGTTGCCCATTGAATTCGTCATCGTTGGGGACTTGGGACAAACAGAATGGACTGCATCAACCTTGAAGCATGTTGACAGCAGCGACTACGACGTGTTCTTGTTACCGGGAGACCTATCCTATGCAGATTCCCAACAACCTTTGTGGGACTCCTTTGGTCGTTTGGTGGAGCCTTACGCTAGTAAAAGGCCATGGATGGTTACCGAAGGAAACCACGAGATTGAGAGTTTCCCTATTATCTACCCACAAGGCTTCCAAGCCTACAACGCTCGCTGGCCCATGCCCTTCCAACAGAGTGGCTCCACCTCAAACCTCTATTACTCCTTCGAGGTTGCCGCCACCCACGTCATCATGCTAGGTTCCTACACTGATTTTGACGCCCAATCAGAGCAGTACACGTGGCTTCAATCTGACCTCGCCAACATTGATAGGGTCAAGACACCTTGGGTGATTGTGCTGTTGCATGCACCGTGGTATAATACTAATGAGGCACACCAAGGTGAAGGTGAATCCATGAGACAAGCCATGGAGGAGTTGCTCTATGAGGCGCGCGTTGACTTGGTTTTTGCTGGCCATGTTCATGCATATGAACGCTTCACTCGAATTTACGACAATAAGGCTGATTCGTGTGGACCGATGTATGTTACAATTGGGGACGGTGGAAACCGGGAGGGACTTGCGTTAATGTTTAAGAACCCTCCAAGCCCGCTCTCGTTGTATCGAGAGCCAAGCTTTGGACATGGAAGGTTGCGGATACTAAATGAAACACATGCACATTGGTCATGGCACCGAAACAATGATGCTGATGCAGTTGTAGCTGATGGTGTTTGGATAGAGAGTTTAAGCAGTTCGAAAACATGCTCCAAGACATTAGACCAACAACATGCTGCTAAGGAAGAGCTATAA 1473 0.4868 MYSISSCLSSSTPLYNRPSIFKAVPFTPSNKLQQSTSTPTQNNNMMGKCSKSLRAFPILLHTLCFLLFPQPLLSQETNFVRQPAGQLIITPHQRSHSDPQQVHISLVGKEKMRVSWVTEDKHAESVVEYGTKAGEYSAKATGVHTSYQYFFYNSGKIHNVVIGPLQPSTTYFYRCGGSGPEFSFKTPPPKLPIEFVIVGDLGQTEWTASTLKHVDSSDYDVFLLPGDLSYADSQQPLWDSFGRLVEPYASKRPWMVTEGNHEIESFPIIYPQGFQAYNARWPMPFQQSGSTSNLYYSFEVAATHVIMLGSYTDFDAQSEQYTWLQSDLANIDRVKTPWVIVLLHAPWYNTNEAHQGEGESMRQAMEELLYEARVDLVFAGHVHAYERFTRIYDNKADSCGPMYVTIGDGGNREGLALMFKNPPSPLSLYREPSFGHGRLRILNETHAHWSWHRNNDADAVVADGVWIESLSSSKTCSKTLDQQHAAKEEL 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03173 490 Gene3D - 190 478 IPR029052 -
Pumo5g03173 490 CDD MPP_PAPs 192 469 IPR041792 -
Pumo5g03173 490 Pfam Calcineurin-like phosphoesterase 195 385 IPR004843 GO:0016787
Pumo5g03173 490 Pfam Purple acid Phosphatase, N-terminal domain 99 186 IPR015914 GO:0003993|GO:0046872
Pumo5g03173 490 PANTHER ACID PHOSPHATASE RELATED 62 472 IPR039331 GO:0003993
Pumo5g03173 490 Pfam Iron/zinc purple acid phosphatase-like protein C 400 457 IPR025733 -
Pumo5g03173 490 SUPERFAMILY Purple acid phosphatase, N-terminal domain 90 188 IPR008963 GO:0003993|GO:0046872
Pumo5g03173 490 SUPERFAMILY Metallo-dependent phosphatases 192 456 IPR029052 -
Pumo5g03173 490 Gene3D - 98 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03173 Pumo-Chr5 80688567 80692798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03173 99 481 Miscellaneous Gene Families AT2G03450 27.609 1.30e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03173 K22390 - gmx:100819446 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03173 5 80688567 80692798 Pumo5g03173 5 80688567 80692798 ECH