Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03171 ATGGCCTCGCTAGTCAACAACGCTAACGGCGCCGTCAACGGCGTTCTCGGAAACGCCGAGAAGCTCATTATTGATACCGACCCTGGGATCGATGACAGCATGGCCCTTTTCATGGCTTTTCAAAGTCCAGATGTGGAGATTCTGGGTTTGACGACCATTTTTGGTAATGCAACTACTGAAGTTGCCACACGCAATGCTTTGATTTTGTGTGAGATCGCAGGCCGTGAAAATATTCCAGTTGCACAGGGAAGCCCTGAGCCATTGAAGGGTGGAACGCCTCGTGTTGCTGATTTTGTTCATGGTGAAGATGGACTAGGGAACACATTCCTACCCCCACCTAAAGGTGAAAAAATTGAGAAGAGTGCTAGTGAGTTTTTGGTAGAGAAGGTCTCTGAATATCCTGGTGAAGTATCTGTGCTAGCACTTGGACCACTAACAAATTTGGCTTTGGCAATCAAAAGAGATTCTTCGTTTGCAAGCAAAGTGAAGAGAATAGTTATACTCGGTGGTGCATTCTTTGCCTTGGGGAATGTGAATCCTGCTGCAGAAGCAAATATCCATGGAGATCCAGAAGCCGCAGATATTGTGTTTACCTCTGGGGCAGATATTGTTGTTGTTGGAATAAACATTACAACCCAAGTCCAATTCACAGATGCTGATCTCCTTGAATTGAAGGAATCTAAAGGAAAGTATGCTCCCTTCTTGAGTAACATATGCAAATTCTATAGGGACTATCATGTAAAATCTGACGGTGTCCATGGTAATTTTTCATTCTACTTCGATGTCGCTAGTTATGCTTCTACCATTAAAGTTGCCATGGGAATGATGATTTGGCTTCTTTCAGGAATTTTCCTCCACGATCCTGTCAGTTTTGTGGCAGTTGTGCGTCCAGATCTTTTCACATACAAGAAGGGGGTAGTGAGGGTAGAGACACAAGGCATCTGTGTTGGGCATACACTTCTGGACCAAGGATTGAAAAAGTTTGTCCAAATTTAA 996 0.4398 MASLVNNANGAVNGVLGNAEKLIIDTDPGIDDSMALFMAFQSPDVEILGLTTIFGNATTEVATRNALILCEIAGRENIPVAQGSPEPLKGGTPRVADFVHGEDGLGNTFLPPPKGEKIEKSASEFLVEKVSEYPGEVSVLALGPLTNLALAIKRDSSFASKVKRIVILGGAFFALGNVNPAAEANIHGDPEAADIVFTSGADIVVVGINITTQVQFTDADLLELKESKGKYAPFLSNICKFYRDYHVKSDGVHGNFSFYFDVASYASTIKVAMGMMIWLLSGIFLHDPVSFVAVVRPDLFTYKKGVVRVETQGICVGHTLLDQGLKKFVQI 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03171 331 Gene3D - 15 330 IPR036452 GO:0016799
Pumo5g03171 331 CDD nuc_hydro_CaPnhB 21 331 - -
Pumo5g03171 331 Pfam Inosine-uridine preferring nucleoside hydrolase 22 323 IPR001910 GO:0016799
Pumo5g03171 331 PANTHER INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE 20 327 IPR023186 -
Pumo5g03171 331 SUPERFAMILY Nucleoside hydrolase 20 323 IPR036452 GO:0016799
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03171 Pumo-Chr5 80666157 80669320 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03171 K01240 - gmx:100787563 534.643