Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03159 ATGGCATCGGCACTGGCCGGGGATGATTTGGCCGTATCATCTAGCAGTCGCCGGAGCTGGACGACGGCAAGTTTCAGGGACGCGTGGACGGCGGCGCCAGACTTGTTCAACGTGAGTGGCCGCCACATGCACGAGGACGACGAGGAAGAGCTCAAGTGGGCCGCCATAGACCGCCTGCCAACTTTTGAACGCATGAGAAAAGGCGTGCTCAGGCACGTGCTTGACGATGGACACGTGGTGCTCGACGAAGTCGATGTTTCCAACCTTCGCTTGCATGACAAGAAGCTCTTAATCGACAGCATACTAAAGATTGTCGAGGAAGATAACGAGAAATTCCTATGCAGACTTAGAGATAGAGTTGATAGAGTGAGGATTGAAATTCCGAAGATTGAAGTTCGGTGCGAGAATTTATCTGTGGAGGGTGATGTGCATGTTGGGAGTAGAGCACTTCCTACCCTGCTTAATGCTACTCTCAATGCTTTTGAGAGTGTTCTGGGAATGTTTCACCTTGCACCGTCCAAGAAGAGAGAAATTCAGATTCTTAAAGATGTTAGTGGAATCGTTAAACCATCAAGGATGACTCTCCTTTTGGGTCCTCCAAGTTCTGGGAAAACAACATTGCTTTTAGCGCTTGCAGGGAAACTTGATCGTGATTTAAGGGTGTCTGGGAGAATCACTTACTGTGGCCATGAGCTAAATGAATTTGTTCCACAAAAAACCTGTGCCTATATTAGTCAACACGACATTCACTATGGAGAAATGACAGTGAGAGAGACATTAGACTTTTCAGGACGTTGTCTAGGTGTTGGTACTAGGTATGAAGCGTTGGTGGAACTCTCAAGAAGGGAGAGAGAAGCAGGAATAAAGCCAGACCCTGAGATTGATGCATTCATGAAGGCTATAGCATTGTCAGGTCAAAAAACCAATTTGGTAACAGATTATGTTCTCAAGATACTTGGATTGGATATTTGTGCCGACATTGTGGTTGGAGATGAGATGAGAAGGGGCATCTCTGGTGGACAGAAGAAGCGAGTAACAACAGGGGAGATGCTGGTAGGACCGGCAAAGGCACTATTTATGGATGAAATATCAACAGGATTGGACAGTTCCACCACCTTTCAAATATGCAAGTTCATGAGGCAAATGGTTCATATAATGGACGTAACCATGGTGATTTCTCTTCTACAGCCCGCACCAGAGACATTTGAACTCTTTGATGACATTATCCTACTTTCAGAAGGTCAAATAGTATACCAAGGTCCACGTGAGAATGTGCTAGACTTCTTTGAACACATGGGTTTCAAGTGTCCTGAGAGAAAAGGAGTTGCTGATTTTTTACAAGAAGTAACATCCAAGAAAGACCAGCAACAATATTGGTCTAGAAAAGATGAACCTTACAGATATGTTTCCGTTCCTGAATTTGTGCAAACTTTTGGTTCATTTGACATAGGAGAGCAACTTGCCACTGAGCTTGGGGTTCCCTATGATAAGAGCCAAGCCCACCCAGCTGCCTTAGTGAAAGACAAGTATGGTATAACAAACTGGGAACTATTTAAGGCATGTTTTTCAAGAGAATGGCTACTTATGAAGCGCAGTTCTTTTGTTTATATATTCAAGACATCACAGATAACAATCATGTCTATTATTACATTTACTGTGTTCCTTAGAACAGAAATGTCAGTGGGAACTGTTCAAGATGGACAAAAATTCTTTGGAGCATTATTCTTCACTCTAATAAACGTGATGTTTAATGGGATGGCAGAACTATCCATGACTGTTTTTAGGCTTCCTGTCTTTTACAAACAAAGAGATTTCAGGTTCTACCCTGCATGGGCATTTGGTTTGCCTATATGGATTCTCAGGATCCCTCTCTCCATTATGGAATCAGGGATATGGATTGCCCTTACATATTACACAATTGGGTTTGCTCCTTCTGCTAGCAGATTTTTCCGACAATTCTTGGCATTATTTGGCATTCATCAGACGGCTCTCTCTCTATTTCGGTTCCTTGCCGCAGCTGGTAGAACACTAGTTGTTGCTAATACACTGGGTACCTTGGCCCTGCAATTGATATTTGTGCTAGGAGGTTTTGTTATTGCCAAAGATGACATTGAGCCATGGATGATGTGGGGCTATTATCTATCTCCTATGATGTATGGTCAGAATGCCCTAGTAATGAATGAATTCTTAGATAAAAGATGGAGTAAACCAAATACAGACCCTAGAATTAATGCACCTACAGTTGGAAAGGTGCTTCTCAAATCTAGAGGCTTCTATACAGAAGAATACTGGTTTTGGATCTGCATTGGAGCCTTGCTTGTGTTTTCTCTTCTCTTCAACCTCTTATTCATTGTTGCTTTAACTTACTTGAATCGTAAGTTATATCCTTTTGATTTCCAAACAGGTACAGATATGGCAGTGAAAAAATCTTCAGAAATGGCTAGTTCTTTGAACCAAGAACCAAGAAGAGGAATGGTTCTACCGTTTCAACCTCTTTCACTTGCATTCAATCATATTAGCTACTACGTAGATATGCCTGCAGAAATGAGGAGTCGAGGAATCAATAAAGATCGACTTCAACTACTACAAGATGTTTGTGGTGCTTTTAGACCAGGCATATTGACAGCACTTGTGGGTGTTAGTGGTGCTGGGAAGACAACCCTTATGGATGTATTAGCTGGAAGAAAAACAGGTGGATACATTGAAGGAAGTATTAGCATCTCAGGTTACCCAAAGAACCAAGCAACATTTGCTCGTATCAGTGGTTATTGTGAACAGAATGACATTCATTCTCCACATGTTACTGTATATGAATCACTATTATTTTCAGCATGGCTTCGCCTTCCTTCAGATGTAAATGCACAAACGCGAAAGATGTTTGTTGAAGAAGTTATGGAGTTGGTTGAGCTTAACCCAATCAGAGATGCACTTGTGGGTCTTCCAGGAGTGGATGGTCTATCAACAGAACAAAGGAAAAGGCTTACTATTGCTGTAGAATTGGTTGCCAATCCTTCAGTTATCTTCATGGATGAACCAACATCTGGCCTTGATGCTAGAGCTGCTGCTATTGTTATGCGAACTGTGAGAAATACAGTAGACACAGGGAGAACTGTTGTGTGCACAATTCATCAACCAAGCATAGACATTTTTGAAGCTTTTGATGAGCTTTTGTTGATGAAAAGAGGAGGACAAGTTATCTATGCTGGACCTCTTGGTCGCCACTCACATAAGCTAATAGAATATTTTGAAGCTATCCCAGGGGTTCCAAAAATCAAGGATGGTTATAATCCTGCCACATGGATGCTTGATATCAGCTCTACTTCAATGGAGGCTAATCTTGAGGTAGATTTTGCAGAGATTTATGCTAAGTCTACCCTTTACCGGAGGAATCAAGAACTTATTGAGGAGCTCAGTTCCCCAGTAGCAGATTCGAAGGACTTGTACTTCCCAACCAAATATTCCCAATCGTTTTTTGTTCAGTGCAAAGCTAACTTCTGGAAACAATATTGGTCCTACTGGAGATATCCTCAGTATAATGCTGTACGATTCTTCATGACAATAGTCGTGGGAGTAATGTTTGGTGTGATTTTCTGGAATAAAGCCAAAGAAACCAATAAACAACAAGATTTAATGAATCTTTTGGGAGCCATGTACGCAGCTATGCTTTTTCTTGGAGCCATGAATGCTTCATCAGTGCAACCAGTTGTTGCCATTGAGAGAACTATCTTCTATCGTGAAAGAGCAGCAGGGATGTACTCTGCATTGCCCTATGCATTTGGCCAGGTGGCAATAGAGGCAATTTATAATGCAATTCAAACAGCCATTTACTCTCTTATCCTTTACTCAATGATTGGGTTTGATTGGAAGGCAACAAGCTTCTTTTGGTTCTACTACTATATATTAATGTGCTTTATGTACTTCACCTTGTATGGGATGATGATTGTAGCACTAACACCGGGTCACCAAGTTGCTGCAATTTGTATGTCCTTCTTCTTGAGTTTCTGGAACTTGTTCTCTGGCTTTATCATTCCTAGGATGCAAATTCCTGTGTGGTGGAGATGGTATTATTGGGCTTCTCCTATTTCTTGGACACTATATGGGCTTATTACGTCACAACTGGGTGACAAAAATGCAGAATTGGAGATACCTGGTGCTGGAAGCATGGGATTGAAGGAATTCCTTAAACAAAACTTGGGTTTTGACTATGACTTCCTTCCAGTTGTTGCTGCTGCTCATGTAGGCTGGGTTCTCCTCTTCGTGTTTGTTTTTGCTTATGGCATCAAATTCTTGAATTTCCAAAGAAGATAG 4308 0.4178 MASALAGDDLAVSSSSRRSWTTASFRDAWTAAPDLFNVSGRHMHEDDEEELKWAAIDRLPTFERMRKGVLRHVLDDGHVVLDEVDVSNLRLHDKKLLIDSILKIVEEDNEKFLCRLRDRVDRVRIEIPKIEVRCENLSVEGDVHVGSRALPTLLNATLNAFESVLGMFHLAPSKKREIQILKDVSGIVKPSRMTLLLGPPSSGKTTLLLALAGKLDRDLRVSGRITYCGHELNEFVPQKTCAYISQHDIHYGEMTVRETLDFSGRCLGVGTRYEALVELSRREREAGIKPDPEIDAFMKAIALSGQKTNLVTDYVLKILGLDICADIVVGDEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQICKFMRQMVHIMDVTMVISLLQPAPETFELFDDIILLSEGQIVYQGPRENVLDFFEHMGFKCPERKGVADFLQEVTSKKDQQQYWSRKDEPYRYVSVPEFVQTFGSFDIGEQLATELGVPYDKSQAHPAALVKDKYGITNWELFKACFSREWLLMKRSSFVYIFKTSQITIMSIITFTVFLRTEMSVGTVQDGQKFFGALFFTLINVMFNGMAELSMTVFRLPVFYKQRDFRFYPAWAFGLPIWILRIPLSIMESGIWIALTYYTIGFAPSASRFFRQFLALFGIHQTALSLFRFLAAAGRTLVVANTLGTLALQLIFVLGGFVIAKDDIEPWMMWGYYLSPMMYGQNALVMNEFLDKRWSKPNTDPRINAPTVGKVLLKSRGFYTEEYWFWICIGALLVFSLLFNLLFIVALTYLNRKLYPFDFQTGTDMAVKKSSEMASSLNQEPRRGMVLPFQPLSLAFNHISYYVDMPAEMRSRGINKDRLQLLQDVCGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQATFARISGYCEQNDIHSPHVTVYESLLFSAWLRLPSDVNAQTRKMFVEEVMELVELNPIRDALVGLPGVDGLSTEQRKRLTIAVELVANPSVIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGRHSHKLIEYFEAIPGVPKIKDGYNPATWMLDISSTSMEANLEVDFAEIYAKSTLYRRNQELIEELSSPVADSKDLYFPTKYSQSFFVQCKANFWKQYWSYWRYPQYNAVRFFMTIVVGVMFGVIFWNKAKETNKQQDLMNLLGAMYAAMLFLGAMNASSVQPVVAIERTIFYRERAAGMYSALPYAFGQVAIEAIYNAIQTAIYSLILYSMIGFDWKATSFFWFYYYILMCFMYFTLYGMMIVALTPGHQVAAICMSFFLSFWNLFSGFIIPRMQIPVWWRWYYWASPISWTLYGLITSQLGDKNAELEIPGAGSMGLKEFLKQNLGFDYDFLPVVAAAHVGWVLLFVFVFAYGIKFLNFQRR 1435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03159 1435 CDD ABCG_PDR_domain1 170 420 IPR034001 -
Pumo5g03159 1435 Pfam ABC-transporter N-terminal 106 156 IPR029481 -
Pumo5g03159 1435 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 438 IPR027417 -
Pumo5g03159 1435 Pfam ABC transporter 181 363 IPR003439 GO:0005524
Pumo5g03159 1435 Pfam ABC-2 type transporter 396 449 IPR043926 GO:0140359
Pumo5g03159 1435 Pfam ABC-2 type transporter 1043 1111 IPR043926 GO:0140359
Pumo5g03159 1435 Pfam Plant PDR ABC transporter associated 734 791 IPR013581 -
Pumo5g03159 1435 SMART AAA_5 190 415 IPR003593 GO:0016887
Pumo5g03159 1435 SMART AAA_5 871 1063 IPR003593 GO:0016887
Pumo5g03159 1435 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 165 438 IPR003439 GO:0005524
Pumo5g03159 1435 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 857 1071 IPR027417 -
Pumo5g03159 1435 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 834 1086 IPR003439 GO:0005524
Pumo5g03159 1435 FunFam ABC transporter G family member 34 168 472 - -
Pumo5g03159 1435 Gene3D - 167 469 IPR027417 -
Pumo5g03159 1435 CDD ABCG_PDR_domain2 831 1069 IPR034003 -
Pumo5g03159 1435 Gene3D - 848 1081 IPR027417 -
Pumo5g03159 1435 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 16 1435 - -
Pumo5g03159 1435 FunFam ABC transporter G family member 40 848 1078 - -
Pumo5g03159 1435 Pfam ABC transporter 863 1014 IPR003439 GO:0005524
Pumo5g03159 1435 Pfam ABC-2 type transporter 1160 1372 IPR013525 GO:0016020|GO:0140359
Pumo5g03159 1435 Pfam ABC-2 type transporter 517 729 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03159 Pumo-Chr5 80524237 80531931 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03159 K08711 - gmx:100786482 2717.95