Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03148 ATGCGAACTGTGATGTTCAACATGTTGGCAACTCATCAGCTCCAGTTCATAGCGATTCTCGTTCTGTCCCTCGTGACCACGTTGACATGCTCTGCAGCCGCAACCACTTCCATCCCACAAGAGCTTCACGTAGGCTTTGCAGCGGTGCCAGAGTCTTCAACGAAGCCGTTTCAAGCAGTTCTGAGCGACCCCGGCGGTAACTTCTCTCTGGGTTTCCTTCGCGTGAACAAAAACCAGCTGGCACTGGCGGTCCTCCACGTGGCATCCTCAGAGCCATTCTGGGTGGCCAACCCAACCCACGCGGCATCCTGGTCCGACACCACGCGCCTCTTCTTCAACGGCAGTCTCGTGTTGTCGGACCCCGAAACGCGCGTTTCGTGGTCAACCGCCACAAACGGAGACCGCGTGGTGCTACTCAACACCTCCAATTTACAGGTTCACCACAAAGGCACTCCCTTGTGGGAGAGTTTTCACTTTCCCACAAATACCCTGGTCCAGGACCAGAATTTCACCTCCAACATGACTTTGCTGTCCTCCAACGGCATTTATTCCATGCGGTTAAGCAGAGATTTCATGGGATTATACGAAGACCACGACTTATTATATTGGAAACGCTCGCCACTGGAAACAAAAGCGGAAGTAAAGGAAGGGCATGGACCGATTTACGCCCGAGTCAACCCCGAGGGTTACCTCGGGATGTATCAAACAAGCGACACGAAGCCCGCCGATGTAAACAAGTTCAACACCTTCCAACAGCCAGTCACAGCGACGTCGTTTTTGTTCGTGCGGTTGGAACAGGACGGGAATCTGAAAGCATATTACTGGGACGGTTCCAAGTGGCTGCTTGACTTCCAGGCTATTCCTGAAGCCTGCGACCTCCCACGCTCCTGCGGTTCCTACGGTTTGTGCACGCCGGGCGGGTCCGGATGCTCCTGTTTGGATAACCGAACCCGGTTCGAATCGGGTGGGTGTTTCGATGATGTTAGTGGGGAGGGAGACTTTTGTAGTAGTAGTGAAGGGATTGGTGGAAAAAGCAGTTACCGGGTGCTGAGAAGAACCGGAGTGGAGCCACAGCATAAGGAGCTACTAAGTCACGTGACGACGTCGTCTTTGGCGGAGTGCGAGGAATTGTGCCAGAACAACTGTAGCTGTTGGGGAACGCTGTATAACAATGAAACCGGAACCGGGTTTTGTTATATGTTGGACTATCCGATCCAGACCATGTTGGGTACCGGGGATAGATCCAAAGTGGGTTATTTCAAGGTTAAAATAGAGGAACGAGGAAAGAATCGGGTTTGGCTGCGGGTTGGGATTGTGGTTGCGGTTTTGGTTATGGTTGGAGTTATTATTATTGGGGCCGGGTTTCGCCTCACGAGATGGAGAAAGAGAGGGGTGAAGGAGGAGGATTGGGCTTCGCCCGGCCCGTATAAGAATCTTGGTTCAGCAAGTTTTAGATCCATTGAAATGAGTAATACTAATACCCGATGA 1488 0.5215 MRTVMFNMLATHQLQFIAILVLSLVTTLTCSAAATTSIPQELHVGFAAVPESSTKPFQAVLSDPGGNFSLGFLRVNKNQLALAVLHVASSEPFWVANPTHAASWSDTTRLFFNGSLVLSDPETRVSWSTATNGDRVVLLNTSNLQVHHKGTPLWESFHFPTNTLVQDQNFTSNMTLLSSNGIYSMRLSRDFMGLYEDHDLLYWKRSPLETKAEVKEGHGPIYARVNPEGYLGMYQTSDTKPADVNKFNTFQQPVTATSFLFVRLEQDGNLKAYYWDGSKWLLDFQAIPEACDLPRSCGSYGLCTPGGSGCSCLDNRTRFESGGCFDDVSGEGDFCSSSEGIGGKSSYRVLRRTGVEPQHKELLSHVTTSSLAECEELCQNNCSCWGTLYNNETGTGFCYMLDYPIQTMLGTGDRSKVGYFKVKIEERGKNRVWLRVGIVVAVLVMVGVIIIGAGFRLTRWRKRGVKEEDWASPGPYKNLGSASFRSIEMSNTNTR 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03148 495 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 52 452 - -
Pumo5g03148 495 Gene3D - 49 158 IPR036426 -
Pumo5g03148 495 ProSiteProfiles PAN/Apple domain profile. 335 424 IPR003609 -
Pumo5g03148 495 PIRSF SLG 3 435 IPR035446 -
Pumo5g03148 495 SMART blect_4 52 160 IPR001480 -
Pumo5g03148 495 Pfam S-locus glycoprotein domain 256 314 IPR000858 GO:0048544
Pumo5g03148 495 Pfam D-mannose binding lectin 93 176 IPR001480 -
Pumo5g03148 495 SUPERFAMILY alpha-D-mannose-specific plant lectins 91 277 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03148 Pumo-Chr5 80278012 80280256 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03148 - - gmx:100814305 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03148 5 80278012 80280256 Pumo5g03148 5 80278012 80280256 ECH