Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03127 ATGGGGGCCTCGCTGTCGAACCTAGGAAGCAACGGTTCGGCCGCCGCTCCGGGCCTCGGCGACATCCCGGAGAGCTGCGTCGCTCGCGTTTTCCTCCACCTCACTCCGCCGGAGATTTGCAACCTCGCGCGCCTCAACCGCTCCTTTCGCGGCGCCGCCTCCGCGGATTCCGTGTGGCAGACCAAGCTGCCTCCCAACTACCAAGATCTGCTCGATTTAATGCCTGCCGGGAGGTACCAGAATCTCACCAAGAAGGACATCTTCGCGCTGCTGTCTCGCCCAGTGCCCTTTGATGACGGCAACAAGGAAGTGTGGCTGGACAGGGTTACGGGAAGGGTTTGCATGTCAATTTCGGCCAAGGCCATGTCTATTACTGGAATTGATGACCGCAGATACTGGACATGGGTTCCTACTGAAGAATCTAGGTTCAACACTGTAGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTCAGCTTCCCATTTCCTGCTGATATTTATACTCTCTCCTTCAGGCTTCACCTTGGACGATTTTCCAAGAGGCTTGGTCGACGTGTATGCAATTACGAACACACCCATGGTTGGGATATAAAACCAGTGAGATTTGAGTTGTCAACCACGGATGGTCAGCAAGCATCATTTGAGTGCTACTTGGATGAAACTGAACCTGATGATGGCAATCATAAGCGCGGACATTGGGTAGATTACAAGGTGGGTGAGTTTATTGTCAGTGGATCAGAACCTACAACTAAAGTACGATTCTCCATGAAACAGATTGATTGTACACACTCTAAAGGTGGGCTTTGTGTAGATTCTGTATTTATTATACCTAGTGATTTGAGAGAGCGCATGAGAAGCGGCATTCTGAAATAA 882 0.5057 MGASLSNLGSNGSAAAPGLGDIPESCVARVFLHLTPPEICNLARLNRSFRGAASADSVWQTKLPPNYQDLLDLMPAGRYQNLTKKDIFALLSRPVPFDDGNKEVWLDRVTGRVCMSISAKAMSITGIDDRRYWTWVPTEESRFNTVAYLQQIWWFEVDGEVSFPFPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVRFELSTTDGQQASFECYLDETEPDDGNHKRGHWVDYKVGEFIVSGSEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSDLRERMRSGILK 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03127 293 Gene3D - 19 61 - -
Pumo5g03127 293 PANTHER F-BOX PROTEIN PP2-A15 6 286 - -
Pumo5g03127 293 SMART fbox_2 22 62 IPR001810 GO:0005515
Pumo5g03127 293 SUPERFAMILY F-box domain 15 74 IPR036047 GO:0005515
Pumo5g03127 293 CDD F-box_AtSKIP3-like 19 64 - -
Pumo5g03127 293 Pfam Phloem protein 2 113 280 IPR025886 -
Pumo5g03127 293 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03127 Pumo-Chr5 80033919 80039107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03127 - - gmx:100807328 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03127 5 80033919 80039107 Pumo5g03127 5 80033919 80039107 ECH