Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03113 ATGAAGCTCTTGGAAAAGGATTTCGCCGTGAACCAAACCGGCACGGCGAAACTCGTGGCCGAAGAACCCGACGACGTGTGGCTCCTCTACAACCTCATCCTCCCCGGCGACGTGGTTTCCGCCGACACCACCCGCAAGGTACACCTCGAATCCTCCGCCAAGAAGAGCACCGCCTCACGTGTCAAGGTCACCCTCGACCTCAAAGTCACGTGCCGCGACTTCCACAAAGACTCCTCCACCCTCCGCCTCCACGGCCGCAACCTCCAACCCAACCAACACGTCGCCGCCGGCTCCTTCCACACCCTCACCCTCGAACCCCACAAACCCTTCCACCTCCGCAAAAAACTCTGGCAAAACGACGCCGTCCAAACCCTAAACGAATCCACCGAGAATTCAAATCCCAATTCCAATTCCCCCGACCTCGCCGTCGTTCTCTTCCACCCGCACCACGCGGAGATCCACCTCATCGCGCAAGGAGTCGCCACGCGCTGCACCAAGATCGAACCCTCTCAAAGTTCGAGAAATTCCGTGTTTTTTCGTCAGGTATTCGCGGCGTTCGTGAAGCGCGTGGATTTTAAGGTTGTTACGCGCGTGGTGATGACGAGCGAGGAGTTTCGTAGGTTTGTGATTTCCGAAGCGAGGAGGTCGAGGATGCGGTGGATCGAGGAGAACCAGTCGCGCATGATAGTCGTGTCGGGCGGTGACAGTTTGGAGAAAGTATTGGGTGACCGGGCGGTGACGGAGTTGGTGAAGGACAACAAGTTGGCGGCGTTTAGGGAGTTGTGGGAGATGGTATGCAGCGATTCGGACCGCGCGTGTTATGGACCCGCGGAGGTGGAGCGTGCGCGTGAGATGAGGGCCATTGAGACACTTTTGATAACCGATGATCTTTATAGGAACGAAGAGGTTGAGACGAGAAAGAGGTACGCGAGTTTGGTGAAGTCGGTGAAAGAGGGTGGAGGAAAGGCTTTGGTGTATTCGTCGAAGCATGTTTCGGCACCGCAATTGGCACAGCTCACCGGTGTTGCGGCCATTCTCAGGTTTCCATTGCCTGAACTCGAAGATGTAAATGGGTGTTGA 1080 0.5639 MKLLEKDFAVNQTGTAKLVAEEPDDVWLLYNLILPGDVVSADTTRKVHLESSAKKSTASRVKVTLDLKVTCRDFHKDSSTLRLHGRNLQPNQHVAAGSFHTLTLEPHKPFHLRKKLWQNDAVQTLNESTENSNPNSNSPDLAVVLFHPHHAEIHLIAQGVATRCTKIEPSQSSRNSVFFRQVFAAFVKRVDFKVVTRVVMTSEEFRRFVISEARRSRMRWIEENQSRMIVVSGGDSLEKVLGDRAVTELVKDNKLAAFRELWEMVCSDSDRACYGPAEVERAREMRAIETLLITDDLYRNEEVETRKRYASLVKSVKEGGGKALVYSSKHVSAPQLAQLTGVAAILRFPLPELEDVNGC 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03113 359 Gene3D Pelota, domain A 1 131 IPR038069 -
Pumo5g03113 359 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 129 IPR038069 -
Pumo5g03113 359 PANTHER PELOTA 1 356 IPR004405 GO:0070481|GO:0070966|GO:0071025
Pumo5g03113 359 SUPERFAMILY L30e-like 256 355 IPR029064 -
Pumo5g03113 359 Pfam eRF1 domain 1 1 128 IPR005140 -
Pumo5g03113 359 Gene3D eRF1 domain 2 140 250 IPR042226 -
Pumo5g03113 359 SUPERFAMILY Translational machinery components 137 254 - -
Pumo5g03113 359 Gene3D - 251 358 IPR029064 -
Pumo5g03113 359 FunFam Protein pelota homolog 251 358 - -
Pumo5g03113 359 SMART eRF1_1_2 1 130 IPR005140 -
Pumo5g03113 359 FunFam Protein pelota homolog 1 131 - -
Pumo5g03113 359 Pfam eRF1 domain 3 258 350 IPR005142 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03113 Pumo-Chr5 79909736 79911403 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03113 K06965 - gmx:100803618 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03113 5 79909736 79911403 Pumo5g03113 5 79909736 79911403 ECH