Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03101 ATGGCCAAGAAGAGGACCACACCTCAGAAGAACAAGAAGAAGAACAACAACAAGACCCAAATGATAATTCCCATGCCAAAGCATTCTCAACAGCCAAGAAGCTCACCTCCCAAACGCCGCACTGATTTCTCTTTCTTCACGCGCTCTCCCTCCTCCTTCACCAACCCTACTTCTGGCTCCTCACCAGGTTCATCTTCCGGTGAAGTGAGGCTGTCCAATGTCGCTGCAAGCAGTCTGCAGGGGAGGAGAATGGCAACGAAACAATTTTCTGAAGATATGCTGGTTCGATGCAGCTTTTACCAAGAGGGTAGACCAGTATGTTCATCTGAGTCTTTTGATACCCCAGTTGTGGAAGTTGATTCAGCTGTTCAAGATGAAAGTCTCAACCTTGGTGGACATAGGGATGCTTGCAATGAAAAAATTGATATTTTCAAGATGTCAGAATCTACCCCTCTTGAATCATCTGTCAGTGATAGCAGTTCTCTTGCTGCAACTCCTGGAAGTATTGTATGGGCGAGGACAGATTGTCAAGTGTGGTGGCCTGCTGAGATCATGGAAGAAACATCTGCGTTATCCAACCCTGGCAGTGATGGACATGTTTTAGTGCAGTTTTATGGAAATCTTCCCAGTGCCTGGATTGATCCAATGACAGATATTTCAACTTTTGAGGATTCTTTTGAAGACAGAAGCAACAACCCTTCAGAAGATTTTCAACAGGCTTTAAAGCAGGCCTTACAGAGGAAGGCACAACTTAGTTCTTGCCAAAAGTTGACTCCTGATAGGTCTGCTCACTCTGATCTGCAAGAACGTTCATCTGATAAATGCACTTCAACTAGCACAAGCAAAACAATTGATGATTTTCAAGAGAGACGAAGAGGGAAAAGGGAACGTAAACCCAAAGTTCACTTTGATGAGGTTACATATCCAATGAAATCAGAAACAAAGGTTCGTCGGTTGAAGATAATGCGGTACCTTGGCCTTGCACCTCCAGTTGGTTCTCCCTTTTGA 1008 0.4444 MAKKRTTPQKNKKKNNNKTQMIIPMPKHSQQPRSSPPKRRTDFSFFTRSPSSFTNPTSGSSPGSSSGEVRLSNVAASSLQGRRMATKQFSEDMLVRCSFYQEGRPVCSSESFDTPVVEVDSAVQDESLNLGGHRDACNEKIDIFKMSESTPLESSVSDSSSLAATPGSIVWARTDCQVWWPAEIMEETSALSNPGSDGHVLVQFYGNLPSAWIDPMTDISTFEDSFEDRSNNPSEDFQQALKQALQRKAQLSSCQKLTPDRSAHSDLQERSSDKCTSTSTSKTIDDFQERRRGKRERKPKVHFDEVTYPMKSETKVRRLKIMRYLGLAPPVGSPF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03101 335 MobiDBLite consensus disorder prediction 1 69 - -
Pumo5g03101 335 Gene3D - 154 258 - -
Pumo5g03101 335 MobiDBLite consensus disorder prediction 13 29 - -
Pumo5g03101 335 CDD PWWP 167 245 - -
Pumo5g03101 335 MobiDBLite consensus disorder prediction 36 69 - -
Pumo5g03101 335 ProSiteProfiles PWWP domain profile. 166 224 IPR000313 -
Pumo5g03101 335 MobiDBLite consensus disorder prediction 256 301 - -
Pumo5g03101 335 SUPERFAMILY Tudor/PWWP/MBT 165 256 - -
Pumo5g03101 335 Pfam PWWP domain 167 246 IPR000313 -
Pumo5g03101 335 PANTHER PWWP DOMAIN-CONTAINING PROTEIN 25 323 - -
Pumo5g03101 335 MobiDBLite consensus disorder prediction 284 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03101 Pumo-Chr5 79609318 79616462 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03101 - - gmx:100801494 537.724