Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03087 ATGGATGGAGAAGCTAAGAGAATGGAAGAAGGCCTCAATTCACCATTGAATGATGATGGTAAGAAGCAGGAAACCATTAAAAGCAGTAACGGAGGTTCTATTATTGATCAGCGTGACAAAGACACAACGGCTAAGCCAATTGGTGAATCCGTACAGCAAATAGCTGAACAGGAGCAACCACTGGTTAAGCAGAAGACCAAGAGGGTTGCAACCCTGGATGCATTTAGGGGTCTCACCATAGTGTTGATGATACTGGTAGACGATGCTGGTGAAGCTTATCCACGCATTGATCATTCCCCGTGGAATGGATGTACTTTGGCCGATTTCGTTATGCCTTTCTTTCTTTTCATTGTTGGGGTTGCCATAGCCCTTGCACTAAAGAGAATCCCCAAGATAAAGGATGCCGTAAAGAAGATAATCCTTAGGACATTGAAGCTTCTCTTCTGGGGTATAATTTTGCAAGGGGGTTACTCTCATGCCCCTGATGATCTCGAATATGGAGTTAACATGAAAATTATCCGATGGTGTGGCATTCTCCAGAGAATAGCTCTTGTATACTGTGTTGTAGCTCTAATAGAGACATTTACCACCAAGCTTAGACCCACTACGTTGGCTCCTGGACACCTATCCATTTTTTCTGCTTATAAATGGCAATGGCTTGGGGGGTTCGTGGCATTTCTCATTTATATGATCACAACCTTCACCCTCTACGTTCCTGATTGGAGTTTCGTGGATCGTTTTAACGCCGATGGACCAAGGAGATACACGGTCAAATGTGGGATGAGAGGACACCTAGGGCCAGCATGTAATGCTGTTGGGTACGTGGACCGACAAGTTTGGGGGGTCAACCATCTTTATTCTCAACCTGTTTGGAGACGCTTGAAGGCGTGTACATTGAGTTCTCCAGGCGATGGTCCTTTTCGTGATGATGCTCCAAGTTGGTGTCGTGCTGCTTTTGAACCCGAAGGCTTGTTGAGTTCTATATCAGCTATCCTCTCTGGCACTATCGGCATCCATTATGGGCACGTCTTGATTCACTTCAAGGGTCATTCGGAGAGGCTAAAACAATGGGTCTCAATGGGGTTTGTGTTACTCATCATAGCCATCATCCTTCACTTTACAGATGCTTTACCAATTAACAAGCAACTCTACAGCTTCAGCTATGTTTGTTTCACAGCTGGGGCAGCTGGAATTGTCTTCTCTGGGTTCTACATACTGATCGATGTTTGGGGGCTCCGCACTCCATTCTTGTTCTTGGAGTGGATAGGAATGAATGCTATGCTAGTGTTTGTGATGGCAGCCGAAGGCATCTTTGCAGCATTTGTAAATGGATGGTATTATGAAGATCCACAAAAATCACTAGTAAGAACCAATTTCTGA 1380 0.4486 MDGEAKRMEEGLNSPLNDDGKKQETIKSSNGGSIIDQRDKDTTAKPIGESVQQIAEQEQPLVKQKTKRVATLDAFRGLTIVLMILVDDAGEAYPRIDHSPWNGCTLADFVMPFFLFIVGVAIALALKRIPKIKDAVKKIILRTLKLLFWGIILQGGYSHAPDDLEYGVNMKIIRWCGILQRIALVYCVVALIETFTTKLRPTTLAPGHLSIFSAYKWQWLGGFVAFLIYMITTFTLYVPDWSFVDRFNADGPRRYTVKCGMRGHLGPACNAVGYVDRQVWGVNHLYSQPVWRRLKACTLSSPGDGPFRDDAPSWCRAAFEPEGLLSSISAILSGTIGIHYGHVLIHFKGHSERLKQWVSMGFVLLIIAIILHFTDALPINKQLYSFSYVCFTAGAAGIVFSGFYILIDVWGLRTPFLFLEWIGMNAMLVFVMAAEGIFAAFVNGWYYEDPQKSLVRTNF 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03087 459 MobiDBLite consensus disorder prediction 1 42 - -
Pumo5g03087 459 PANTHER LD22376P 52 454 - -
Pumo5g03087 459 MobiDBLite consensus disorder prediction 1 25 - -
Pumo5g03087 459 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 68 209 IPR012429 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03087 Pumo-Chr5 79159643 79163657 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03087 K10532 - gmx:100819967 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03087 5 79159643 79163657 Pumo5g03087 5 79159643 79163657 ECH
Pumo5g03087 5 79159643 79163657 Pumo3g02204 3 33814735 33821230 PCT