Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03068 ATGCTTAGGTCTTGTGTTAAGAAGTTGCAAAATAGTCTCTCGCTCTTTGTTCACTCCAACAAAGATCAACTGGAAGCAGCAACATTAGTGCCAGAAGATGTTATGGAGGGACATTTTGCTGCTCTTGCCATCAAGGGTGAAGAAACCAGAAGGTTTGTTGTTAAGTTAGACTATTTGACTGATCCTATGTTTATGGAACTACTGAACCAGGCTCGAGAGGAGTTTGGTTTCAAGCAAAAGGGAGCTCTTGCAGTCCCTTGCAGGCCTCAAGAACTACAGAACATTCTAGATGGTCCAAGACCCAAAGCTGAAAGGTAG 318 0.434 MLRSCVKKLQNSLSLFVHSNKDQLEAATLVPEDVMEGHFAALAIKGEETRRFVVKLDYLTDPMFMELLNQAREEFGFKQKGALAVPCRPQELQNILDGPRPKAER 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03068 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 94 IPR003676 GO:0009733
Pumo5g03068 105 Pfam Auxin responsive protein 28 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03068 Pumo-Chr5 78850581 78850898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03068 31 96 Calmodulin-binding Proteins AT5G20810 42.424 1.60e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03068 - K14488 gmx:100794061 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03068 5 78850581 78850898 Pumo5g03068 5 78850581 78850898 ECH