Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03057 ATGGCGTCCGAAGGCATTCTCCTCGGCATGGGTAACCCTCTTCTCGACATCTCCGCCGTCGTTGACGAAGAATTCTTAAAAAAATATGATATCACCTTGAACAATGCGATTCTCGCCGAGGACAAGCACAAGCCTATGTATGAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAGGTGCTACTCAGAATTCAACCAGGGTTGCTCAATGGATGCTCCAAGTTCCTGGTGCAACAAGTTACATGGGTGGCATAGGAAAGGATAAGTTTGGGGAAGAGATGAAGAAGAACTCAAGGCTTGCTGGTGTAAATGTTCACTATTATGAAGATGAAACTACACCTACTGGAACTTGTGCTGTTTGTATAGTTGGTGGTGAAAGGTCTCTTGTGGCGAACTTAGCAGCTGCAAATTGCTACAAGTCTGATCATTTGAAGAGACCAGAAAATTGGGCACTGGTTGAAAAGGCCAAGTATATTTATATTGCTGGCTTTTTCCTCACTGTATCACCAGATTCCATCCAGTTAGTTGCTGAGCATGCTGCTGCAAATAACAAGATCTTCTCAATGAACCTTTCTGCCCCTTTTATCTGCGAGTTATTCAGGGATGTACAGGAGAAAGCTCTACCGTATACGGACTTTGTTTTTGGAAATGAGACTGAAGCAAGAACATTTTCTAAAGTTCATGGCTGGGAGACTGATAATGTTGAGGAGATAGCTCTAAAGATTTCCCAGTGGCCAAAGGCATCAGGAACACACAAAAGGATAACAGTTATCACACAGGGTGCGGATCCTATTTGTGTTGCTGAGGATGGAAAGGTGAAAAAGTTCCCTGTGGAACTTTTGCCTAAAGAGAAACTAGTTGATACTAATGGAGCAGGAGATGCATTTGTTGGAGGATTTCTTTCTCAATTGGTTCAGGAGAAGCCCATTGAAGAATGTGTGAGAGCTGGCTGTTATGCAGCAAACGTTATCATCCAAAGGTCTGGCTGTACGTACCCAGAGAAGCCTAATTTTCATTGA 1026 0.4308 MASEGILLGMGNPLLDISAVVDEEFLKKYDITLNNAILAEDKHKPMYEELAEKYNVEYIAGGATQNSTRVAQWMLQVPGATSYMGGIGKDKFGEEMKKNSRLAGVNVHYYEDETTPTGTCAVCIVGGERSLVANLAAANCYKSDHLKRPENWALVEKAKYIYIAGFFLTVSPDSIQLVAEHAAANNKIFSMNLSAPFICELFRDVQEKALPYTDFVFGNETEARTFSKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPICVAEDGKVKKFPVELLPKEKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYAANVIIQRSGCTYPEKPNFH 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03057 341 Pfam pfkB family carbohydrate kinase 27 335 IPR011611 -
Pumo5g03057 341 PANTHER ADENOSINE KINASE 2 341 IPR001805 GO:0004001|GO:0006166
Pumo5g03057 341 Gene3D - 8 327 IPR029056 -
Pumo5g03057 341 PRINTS Adenosine kinase signature 83 97 IPR001805 GO:0004001|GO:0006166
Pumo5g03057 341 PRINTS Adenosine kinase signature 261 280 IPR001805 GO:0004001|GO:0006166
Pumo5g03057 341 PRINTS Adenosine kinase signature 152 178 IPR001805 GO:0004001|GO:0006166
Pumo5g03057 341 PRINTS Adenosine kinase signature 66 75 IPR001805 GO:0004001|GO:0006166
Pumo5g03057 341 PRINTS Adenosine kinase signature 114 129 IPR001805 GO:0004001|GO:0006166
Pumo5g03057 341 FunFam Adenosine kinase 2 54 327 - -
Pumo5g03057 341 FunFam Adenosine kinase a 15 65 - -
Pumo5g03057 341 CDD adenosine_kinase 4 335 - -
Pumo5g03057 341 Gene3D - 15 134 - -
Pumo5g03057 341 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 290 303 IPR002173 GO:0016301
Pumo5g03057 341 SUPERFAMILY Ribokinase-like 8 334 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03057 Pumo-Chr5 78743964 78748074 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03057 K00856 - gmx:100810561 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03057 5 78743964 78748074 Pumo5g03057 5 78743964 78748074 ECH
Pumo5g03057 5 78743964 78748074 Pumo3g03237 3 59744446 59744960 PCT