Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03044 ATGGACACCAAGGCTTTCAAATTCCAGATCCTGAACGGCTCCATCGCGAGGCGCGTGGTCATTCGCTCAATCCTACTCGCGTGCGCCATTTCAATTGTCTCTCTGTACCGCGCGCAATCCCTCTTCGATGTGGGAACCCTCGCTCCCATCGCCACCTACTTCAACTGCTATTCCGGATTCGAGGGCGTCACCTTCCGCCCCGGTTCCCATTTACTCCGAACCCGCTTCTGGGCCTCCGCGAATTGCCAAAAAGACGCCAACTTGACCGTCACCGTGGTCACCGAGCTAATGGGTAACCAGTTGCTACACACCGGAGCGAAGAGCCTCTGCGTCGGAGAAGGCTCCTCAATGGCCGTCACGGCAATGAAACAGTTAGGTTTCTCCAGCGTCAGCGCCGTCCAAACTCACCGTTTCGAGCAGAGGAACGCCCTGTACGAGGATAATTCCTTCGATTTCGTGTTTTCTAGAGACCTCGACAAGGTTCCTGTCCCTGCTTTGCTCGTTCTCGAGGTTGAGCGTGTCCTTAAGCCACGTGGCATTGGTGCCTTTCTTGTAGGTACCACTAGTTCTCACCCCAATGATTTGATAAGAGCAGCCACACCCGTGTCCTCTTTGTTAAGGTCTTCCACTGTGGTGCATGTTGGTTCCGTCAATGAGCTTAACCTTGTTGTTTTCAAGAAACGAGTTGAAAACGCTACTTCATTTTACCAACATGGTTTACCCGCTGATTGTCCAAGTCTCACCTTCACCAAGCCCCTCATAGAGTTAATGGAGCCTCTCGTGAGTGAGAAACAGAACCAACCACCTCTTGAGTTTCACAAGAGGATTCCCTATTTGCCTAAGTTTGTGGATGTTTCCACTAGGAAGAGGTTGGTGTATATTGATATTGGGGTAGGGGAGCTTCCTGATGCCAATGTTAGTGATTGGTTCCTACCATCGTACCCCATTGATCAGAAAGATTTCAATGTCTATTTTGTTCACTACAACACTTCAATTATGTTGTCTTATGTGAAGCGACCTGGTATCACCTTTGTTTATCACCCTGGGTTGGCTGGGATTGGTAAGGTCACAGGTAAGCTTGGCACTGATGATGATGACATGGATCCTTTACTTGGGGAGGAGGAGCAGTTTGATTTCCTTGCCTGGTTCAAAGAAACTGTGCAATATGCTGATTTCGTGGTTCTCAAGATGAATGCAGGAATCGTTGAACTCAAGTTCCTCTCGGATATATTTGACAATGGAGCTATATGCCTTGTTGATGAGTTGTTTCTCAAGTGTCCCGAGAGGGGAGGTGATGAGAAAACTGTGACCAGCAAGGAAAGTTGCATGGATATTTACAAGGGTCTCCGAAGCAATGGTGTCTATGTCCATCAATGGTGGGGAGACTGA 1389 0.4881 MDTKAFKFQILNGSIARRVVIRSILLACAISIVSLYRAQSLFDVGTLAPIATYFNCYSGFEGVTFRPGSHLLRTRFWASANCQKDANLTVTVVTELMGNQLLHTGAKSLCVGEGSSMAVTAMKQLGFSSVSAVQTHRFEQRNALYEDNSFDFVFSRDLDKVPVPALLVLEVERVLKPRGIGAFLVGTTSSHPNDLIRAATPVSSLLRSSTVVHVGSVNELNLVVFKKRVENATSFYQHGLPADCPSLTFTKPLIELMEPLVSEKQNQPPLEFHKRIPYLPKFVDVSTRKRLVYIDIGVGELPDANVSDWFLPSYPIDQKDFNVYFVHYNTSIMLSYVKRPGITFVYHPGLAGIGKVTGKLGTDDDDMDPLLGEEEQFDFLAWFKETVQYADFVVLKMNAGIVELKFLSDIFDNGAICLVDELFLKCPERGGDEKTVTSKESCMDIYKGLRSNGVYVHQWWGD 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03044 462 PANTHER PEPTIDE UPSTREAM PROTEIN 1 462 - -
Pumo5g03044 462 Pfam Methyltransferase domain 137 180 IPR013216 GO:0008168
Pumo5g03044 462 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 188 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03044 Pumo-Chr5 78473374 78475246 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03044 - - gmx:100783651 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03044 5 78473374 78475246 Pumo3g03291 3 60544371 60546534 PCT