Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03041 ATGGCAAAGCTATTCAATTTCCTCCCTCTCCTCTTGCTCAACCTCTTCATCCAAACAATTTCAGCCCAAGTAGCTCCAGCACCAGCAGGACCCACCAACATCACCCAAGTCCTAGAGAAAGCAGGCCAATTCACAACCTTCATCAAACTTCTCAAAGCCACACAAATATCTGACAGAATCAACTCACAGCTCAACAACTCAAACCAAGGCCTAACCGTCTTTGCACCCACAGACAATGCCTTCTCAAGCCTCAAAGCAGGAACACTAAACTCCATAAACTCACAAGACCAAATGCAGCTGATACAGTTCCACATTCTCCCCACTCTCTACACCGTCTCACAGTTCCAAACCGCAAGTAACCCTTTGCACACACAAGCTGGGAACAGTGACGACGGCGAGTACCCTTTAAACGTTACCACCTCAGGGAACCAAGTGAATGTAACAACTGGGGTGGTTGATACAACAGTGTCCAACACTATCTACAGTGATAACCAGCTTGCAGTGTATCAGGTCGATAAGGTGCTTCTTCCCATGAAACTTTTTGGCACGACAGCTCCGGCTGCTGCACCGGCGGAGGCTCCGGCGCCGACCAAGCCGGAGAAAAATGTCCGGGCAGGGGCAGCTGATGCTCCATCTGGGTCATCGGATACATCCGCTGATGCTTCCAGTGCAGTGAGCTTGAATAGAAAGACAGTTAAAGGTTTTATCATCACCGTGGCAATCATTGTTTCTTGTTTGTGGATGTAA 747 0.4873 MAKLFNFLPLLLLNLFIQTISAQVAPAPAGPTNITQVLEKAGQFTTFIKLLKATQISDRINSQLNNSNQGLTVFAPTDNAFSSLKAGTLNSINSQDQMQLIQFHILPTLYTVSQFQTASNPLHTQAGNSDDGEYPLNVTTSGNQVNVTTGVVDTTVSNTIYSDNQLAVYQVDKVLLPMKLFGTTAPAAAPAEAPAPTKPEKNVRAGAADAPSGSSDTSADASSAVSLNRKTVKGFIITVAIIVSCLWM 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03041 248 ProSiteProfiles FAS1/BIgH3 domain profile. 31 175 IPR000782 -
Pumo5g03041 248 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 9 229 IPR045003 -
Pumo5g03041 248 Pfam Fasciclin domain 43 177 IPR000782 -
Pumo5g03041 248 SMART fasc_3 72 178 IPR000782 -
Pumo5g03041 248 MobiDBLite consensus disorder prediction 189 223 - -
Pumo5g03041 248 SUPERFAMILY FAS1 domain 30 177 IPR036378 -
Pumo5g03041 248 FunFam Fasciclin-like arabinogalactan protein 11 14 177 - -
Pumo5g03041 248 Gene3D FAS1 domain 17 177 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03041 Pumo-Chr5 78449410 78450542 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03041 - - gmx:100784186 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03041 5 78449410 78450542 Pumo5g03041 5 78449410 78450542 ECH