Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03011 ATGAGAGATTTCGTGATCCTTGGCTCTTCCGTCGTAACTCCCTTTTCTTCTTCTTCTTCTCAACATCGCCACCCCATCAAACCCCACAAGCATTCTCTCCCAAAGCTCGCTCCTTTTTCTCCCTCTTCTTCCAATTGGAACATTTCCTGCGCCCTCCAAGCCCCACTCGCTCTCAACCACTGCGCTGATTCCAAGCTTCTTCAGGATTTTGAAGTGGCTGTTGAGGACGTGATTGATTCTGGGGTTGACGCTGAGCTTCTGGCCAAGGTGGTTCTGTTGGGAATTCGAGGGAAGAAGGTTCGGAGTGTCATTCACGCCCTCAACAAAGTTCAGGGTCAGAGAATTTCTTTATCTACTCATCTTAATGGCTCTGATGTCATTGCAAAGGAGTGTGGCCGCTTGGTCACGTGCGGCCACGTTGAGGAGGCTGTTGAACTCATGGAGGTTCTCGCACGTTTCCAGATATCAATCAGGGAACTAGTTCAGCCGTCTGACATAATTAAACGATGTGTTCTTAGTCGGAACCCAATTTTGGCTGTGAGGTATGCATGTCTTCTTCCCCATGCACATATATTGTTCTGCAATATTATATCAGAATTTGGCAAAAGGAGGGATTTAGTTTGTGCTTTGAAAGCATATGAGGCGTCGAAGAAACACTTGAATACTCCCAATATGTACATATACCGGGCAACAATTGACGCTTGTGGTCTATGTCGTGATTGCATGAAATCTAGGTACATATATGAGGATTTGCTTAATCAAAAGATCACTCCAAATATATACGTGTTCAACAGTCTCATGAATGTGAACTCCCATGATCTTAGCTACACGTTAAATCTATATCAAAATATGCAGAATCTCGGTTTAAAACCAGATATGACATCTTATAACATCCTACTGAAAGCATGCTGTGTTGCTGGAAGAGTTGATCTGGCTCAAGACATTTATAGGGAACTTAAGCATTTGGAATCAGTGGGACAGCTAAAATTAGATGTCTTTACTTACAGCACAATTATAAAGGTCTTTGCAGATGTAAAATTGTGGCAGATGGCTCTAAAAATCAAGCAAGACATGCTGTCTGCTGGTGTTTCGCTTAATATTGTTGCATGGTCATCATTAATCAATGCCTGCGCACATGCAGGGCTTGTAGAGCAGGCAATTCAGTTATTTGAAGAAATGCTTTTGGCTGGCTGTGAACCTAATACGCAGTGTTTCAACATAATTTTAAATGCATGCGTTGAAGCTTACCAATATGACAGGGCTTTTCGCTTTTTCCATTCTTGGAAGGGAAAAAAGATGTTGGGGTCATCTGGTGAAGGCTACAATAGCAATATAGGGCAGGGACGCATGCATAATGTTACTTCAATGCCAAATGGCATTTCTAATTCACACATCTTGAGTTTTGCTGAGAGGTTCCCTTTCACACCAACTACAACAACATACAATATCTTGCTGAAGGCCTGTGGTACTGATTATTACCATGCAAAAGCATTAATCAAAGAGATGGAAACAGTAGGTCTGTCCCCTAATCAGATAAGCTGGTCAATTTTGATAGATATATGTGGAGCATCAGCAAATGTGGAGGGTGCCATCGAGATTTTGAAAACCATGGGTGATGCTGGAATTAAACCTGATGTTATTGCATATACAACAGCCATTAAGGTTTGTGTTGAAAGTAAGAATTTTATGCAAGCATTAACATTATATGAAGAAATGAAAAGCTATCAGATACGTCCAAATTGGGTGACATATAACACACTTCTGAAGGCACGCAGTAAATACGGCTCCCTACACGAGGTGCAACAATGCCTGGCTATATACCAGGATATGCGAAAGGCAGGGTACAGACCCAATGACTACTATCTGGAAGAACTGATTGAGGAGTGGTGTGAAGGAGTTATACAAGATAACAGAGAGAAGCAAGGAGAATTTTCTTCCAGCAATAAATCTGAATTAGAGAGACCCCAAAGTTTACTTCTTGAAAAAATTGCAGCTCACCTGCTAAAGAGGGTAGCTGACATCCTAGCAATTGATGTTCAAGGGCTCACAAAGGTTGAAGCTCGTTTGGTTGTTCTTGCAGTTCTTCGAATGATCAAAGAGAATTACATTTTAGGACATTCAGTAAATGATGATATCTTGATCATCATAGGAGCTACTAAAGTAGACGAAAATCCATCCAAACGCATATTAGAAGTGCAAGAGGCAATAATAAAACTTCTTAGGAATGAGTTGGGGCTTGAAGTTTTTCCAGCCAGAACCAGATTAGCACTAAGTGACACAGCAAAGTTAGAGTACCCCAACCGTTCAAATCTCAACATAGAAGCACTACCAGGAGAGGCTGCATTGGGGTTTCAGACAAGGAGACCTGGAGTTCTAGTAAGGTTGAAGGTCACCAAAAAATCATTATACAGTTGGTTGCACAGGAAGTAA 2430 0.4156 MRDFVILGSSVVTPFSSSSSQHRHPIKPHKHSLPKLAPFSPSSSNWNISCALQAPLALNHCADSKLLQDFEVAVEDVIDSGVDAELLAKVVLLGIRGKKVRSVIHALNKVQGQRISLSTHLNGSDVIAKECGRLVTCGHVEEAVELMEVLARFQISIRELVQPSDIIKRCVLSRNPILAVRYACLLPHAHILFCNIISEFGKRRDLVCALKAYEASKKHLNTPNMYIYRATIDACGLCRDCMKSRYIYEDLLNQKITPNIYVFNSLMNVNSHDLSYTLNLYQNMQNLGLKPDMTSYNILLKACCVAGRVDLAQDIYRELKHLESVGQLKLDVFTYSTIIKVFADVKLWQMALKIKQDMLSAGVSLNIVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILNACVEAYQYDRAFRFFHSWKGKKMLGSSGEGYNSNIGQGRMHNVTSMPNGISNSHILSFAERFPFTPTTTTYNILLKACGTDYYHAKALIKEMETVGLSPNQISWSILIDICGASANVEGAIEILKTMGDAGIKPDVIAYTTAIKVCVESKNFMQALTLYEEMKSYQIRPNWVTYNTLLKARSKYGSLHEVQQCLAIYQDMRKAGYRPNDYYLEELIEEWCEGVIQDNREKQGEFSSSNKSELERPQSLLLEKIAAHLLKRVADILAIDVQGLTKVEARLVVLAVLRMIKENYILGHSVNDDILIIIGATKVDENPSKRILEVQEAIIKLLRNELGLEVFPARTRLALSDTAKLEYPNRSNLNIEALPGEAALGFQTRRPGVLVRLKVTKKSLYSWLHRK 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03011 809 NCBIfam pentatricopeptide repeat 512 546 IPR002885 -
Pumo5g03011 809 NCBIfam pentatricopeptide repeat 368 402 IPR002885 -
Pumo5g03011 809 NCBIfam pentatricopeptide repeat 548 581 IPR002885 -
Pumo5g03011 809 NCBIfam pentatricopeptide repeat 333 366 IPR002885 -
Pumo5g03011 809 NCBIfam pentatricopeptide repeat 295 320 IPR002885 -
Pumo5g03011 809 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 580 617 IPR002885 -
Pumo5g03011 809 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 331 365 IPR002885 -
Pumo5g03011 809 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 545 579 IPR002885 -
Pumo5g03011 809 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 292 322 IPR002885 -
Pumo5g03011 809 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 510 544 IPR002885 -
Pumo5g03011 809 Pfam PPR repeat family 366 413 IPR002885 -
Pumo5g03011 809 Pfam Pentatricopeptide repeat domain 223 269 IPR002885 -
Pumo5g03011 809 Pfam Pentatricopeptide repeat domain 533 590 IPR002885 -
Pumo5g03011 809 Pfam Pentatricopeptide repeat domain 280 342 IPR002885 -
Pumo5g03011 809 Gene3D Tetratricopeptide repeat domain 324 455 IPR011990 GO:0005515
Pumo5g03011 809 Gene3D Tetratricopeptide repeat domain 463 662 IPR011990 GO:0005515
Pumo5g03011 809 Gene3D Tetratricopeptide repeat domain 191 323 IPR011990 GO:0005515
Pumo5g03011 809 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 366 400 IPR002885 -
Pumo5g03011 809 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL 380 630 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03011 185 643 Miscellaneous Gene Families AT4G11690 23.156 8.91e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03011 - - gmx:100794606 1493.4