Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02989 ATGAATGTGGTGGGCAAAGTTGGAAGCTTGATAACCAAAGGTGTCTATTCAGTTGCTACCCCTTTTCACCCCTTTGGTGGGGCTGTTGATGTCATTGTTGTTCAGCAGCAAGATGGCACGTTCCGGTCCACGCCGTGGTATGTTCGCTTTGGTAAGTTTCAAGGTGTGCTCAAAGGTGCTGAGAAGATTGTTCGGATAAATGTCAACGGGGTTGAAGCAAACTTCCACATGTATCTTGACAATTCAGGGGAGGCTTATTTTGTAAAAGAGGTGGATGACGATGGTGGTGATAAAGGAATCAAGTCAAATGGGGCTGCCAAAGCTGCTGATAACTCTGAATTTAGTCAAGAAGGTGGTGGTGTCGAAACCGATAAAAAAAATAATGGTTATTTGAGTATGGATGATACACTTGGTTATAGACTTGACCATAGCATATCTGATTCAGGGGTGCCGTATCTTACTGGTGAAGGCCGGTCCTCAGTTTTGTCACAACTTCGAAGGGAAGAATCTGATGTTGATAGGATATTTTATGAATTCCCAGATGATCAATCCTCTTTTGAAGGTTCACTTGATGTTTCTGAATATGAATCTAGTCGATATGAGAATCTAGATGCAGGGAATTTTGTGGACTCACAGGGTTCCCAGCCGGAGGTGGTCTTGGTCAGTGTTGATGGTCATGTACTGACAGCCCCTATCTCAGAATCAGAGCAGAATGAGGACAATCTGCAGTTAAAAACTCCTCAATTTCATCTAGGCCCAGGTGAAGGGACTGACTTCTATGAAGGCAATGGAGAATTTATTTCTGATGAAAATGCTTGGGCTGCTGATTATGTTAGTCAGGTGGATGCTTCAACAGCTGATGTTCCAGCTAGTAGTTATGACACTAAGGTTAGTGATGATACTTCTGGGCTCCTGTTGGAAGCTCAAAGAAAGGAGGCAACTATTTGTCACACTGAGGAAACCTTGGTGATTACAAATCAAGAAGATCATGATTTGCAAACTGATTCAGAAGAGGTTGTATCTTGTATGAAGAGAGAGAGTGTCTTCAAAAGTTGTTTGGAATTACATGAGTTTACTCAGCAGGCTGGAAATGCTGATTTACAAGATGTAGGTTCTTCATTGGAGGTTCAAAATTCAGCAGAGGAATCTAATGCAAATTGTTCAATTACTGATGAAAATGAACAGGAAAACATCAAACAATCTAGAGACATTGACGAGTTATCTCCCCTTAGTGGGCCTACTTACTTGGATGAACATAGTTCTCTAGAATTAGAAGTAGAACTTCAAGAGGTTGATAAAGATGCATCAGTAGAAGTTGAAACTGGTTCTGGCAGTCATTCTGGTACTAAGGATATTATTGAATGGAATGATGAACATGTTGGAAAGTCAGTATCAAATGATCAGGTAGACGATAATCAACAAACCTCTGCACTTGAAGATTCTTGTAAGAAAAGTGAACTAACTGAACCTCAAACTGCAACTTCCAATGAGGAGGACCAAAGTCATTCTGCTTTGAGATTTGAGGCCTCACTTTGTAGTCATGAACTTAAATCGGGTATGGGTTTGATTGCTGCTGCTGAGGTTTTTGAAGCACATCGGATATCTGCAGAAGAATTTAGAAGTTCTGCATCATCCATAATTAAGAATGAAAATCTTGTTCTGAAGTTCAGAGAGAGGTATCTGCTGTGGGAAAAGGCTGCTCCTCTTGTTCTTGGAATGACTGTATTTGGTTTAGACTTACCTGTTGAGCCCAAAGATACAATTCCAGTGGGACAGGATGATGCAGTGAAGGCAAAGAATGATGGTCCTGGACCAGCTTCGTCTGGACGCAGATGGAGACTTTGGCCTATGCCTTTTCGAAGAGTCAAGACAATTGATCACACTGATAGTGTATCAAGTGAGGAGGTATTTGTAGATTCTGAGTCTGATTGGCAAACTTCTGTTGTCGAGCCATCTCCAACATCTGCTAGGCATGAGTCTCCTCGCAAGCAATTTGTGAGGACAAATGTTCCCTCTAATGAGATGATAGCATCCTTAAATCTCAAAGATGGTCAAAATTTGGTAACCTTCAGTTTCTCTTCCAGGGTTCTTGGAACGCAACAGGTTGATGCTCATATATACTTATGGAAGTGGAATGCAAAAATTGTAATTTCAGATGTAGATGGAACTATTACCAAATCTGATGTTTTGGGGCAGTTCATGCCTTTAGTTGGCAGAGATTGGACACAGTCTGGAGTGGCAAGGCTTTTCTCAGCTATTAAAGAAAATGGATACCAGCTACTGTTTTTGAGTGCCCGTGCTATTGTCCAAGCTTATCTAACGAGGAACTTTTTGATTAACCTGAAACAGGATGGCAAGACCTTACCGAATGGACCTGTTGTTATTTCACCTGATGGATTATTTCCCTCTCTTTACCGAGAAGTGATAAGAAGAGCACCTCATGAGTTCAAGATCGCTTGTCTAGAGGATATCAAAAGACTTTTCCCTTCCGATTATAATCCGTTCTATGCGGGGTTTGGCAATAGAGACACGGATGAACTTAGTTACAGGAAGATAGGAATCCCGAAGGGCAAGATATTTATTATTAATCCCAAGGGTGAGGTGGCAATAAGTCATCGTATTGATGCAAAATCTTACACATCATTGCACACACTGGTCAATGATATGTTCCCTCCCACTTCTTTGGTCGAGCAGGAGGACTTCAACTCATGGAATTATTGGAGAATGCCTTTTCCAGACGTTGATTAG 2748 0.4141 MNVVGKVGSLITKGVYSVATPFHPFGGAVDVIVVQQQDGTFRSTPWYVRFGKFQGVLKGAEKIVRINVNGVEANFHMYLDNSGEAYFVKEVDDDGGDKGIKSNGAAKAADNSEFSQEGGGVETDKKNNGYLSMDDTLGYRLDHSISDSGVPYLTGEGRSSVLSQLRREESDVDRIFYEFPDDQSSFEGSLDVSEYESSRYENLDAGNFVDSQGSQPEVVLVSVDGHVLTAPISESEQNEDNLQLKTPQFHLGPGEGTDFYEGNGEFISDENAWAADYVSQVDASTADVPASSYDTKVSDDTSGLLLEAQRKEATICHTEETLVITNQEDHDLQTDSEEVVSCMKRESVFKSCLELHEFTQQAGNADLQDVGSSLEVQNSAEESNANCSITDENEQENIKQSRDIDELSPLSGPTYLDEHSSLELEVELQEVDKDASVEVETGSGSHSGTKDIIEWNDEHVGKSVSNDQVDDNQQTSALEDSCKKSELTEPQTATSNEEDQSHSALRFEASLCSHELKSGMGLIAAAEVFEAHRISAEEFRSSASSIIKNENLVLKFRERYLLWEKAAPLVLGMTVFGLDLPVEPKDTIPVGQDDAVKAKNDGPGPASSGRRWRLWPMPFRRVKTIDHTDSVSSEEVFVDSESDWQTSVVEPSPTSARHESPRKQFVRTNVPSNEMIASLNLKDGQNLVTFSFSSRVLGTQQVDAHIYLWKWNAKIVISDVDGTITKSDVLGQFMPLVGRDWTQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRNFLINLKQDGKTLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISHRIDAKSYTSLHTLVNDMFPPTSLVEQEDFNSWNYWRMPFPDVD 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02989 915 MobiDBLite consensus disorder prediction 98 127 - -
Pumo5g02989 915 MobiDBLite consensus disorder prediction 466 500 - -
Pumo5g02989 915 Pfam LNS2 (Lipin/Ned1/Smp2) 670 891 IPR013209 -
Pumo5g02989 915 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 508 613 IPR031703 -
Pumo5g02989 915 MobiDBLite consensus disorder prediction 381 416 - -
Pumo5g02989 915 MobiDBLite consensus disorder prediction 432 502 - -
Pumo5g02989 915 SUPERFAMILY HAD-like 707 857 IPR036412 -
Pumo5g02989 915 SMART lns2 715 871 IPR031315 -
Pumo5g02989 915 MobiDBLite consensus disorder prediction 451 465 - -
Pumo5g02989 915 Pfam lipin, N-terminal conserved region 1 94 IPR007651 -
Pumo5g02989 915 MobiDBLite consensus disorder prediction 589 608 - -
Pumo5g02989 915 PANTHER LIPIN 1 915 IPR026058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02989 Pumo-Chr5 77834765 77842296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02989 K15728 - gmx:100780784 1667.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02989 5 77834765 77842296 Pumo3g02604 3 39286895 39288226 PCT