Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02943 ATGGAGGAAGCGCTGGAACTGTCACGCGCGAAGGACACGAAGGAGAGGATGGCGGGCGTGGAGCGCCTCCACCAACTTCTAGAAGCTTCCAGAAGGAGCCTCTCCTCTTCCGAAGTGACCTCGCTCGTCGACACGTGTATGGATCTCTTGAAGGACAACAACTTCCGCGTCTCGCAGGGCGCGCTCCAGGCCCTCGCCTCCGCCGCCGTCCTCGCCGGCGAACACTTCAAGCTCCACTTCAACGGCCTCCTCCCCGCCGTCGTCGACCGCCTCGGCGACGCCAAGCAGCCCGTCCGCGACGCCGCCAGGCGCCTCTTGCTCACTCTCATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGGCACATAAAAGCTGGAGAGTTAGAGAGGAGTTTACACGAACTGTCACGGCTGCAATTAATCTATTTGCATCTACTGAGCTTCCACTTCAACGGGCTATCCTTCCCCCTGTTTTGCATTTGCTTAATGATCCAAATCCTGCTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATACACAAGCTGGGCCTCAATTTCGTGACGAACTTCACCGCCACAATCTTCCTTCATCTTTGGTGAAAGATATTAATGCCAGGCTCGAGGGAATTCAACCAAAAGTTCGCTCTTCGGATGGTATTCCAGGTGGATATATTACTGGGGAAATTAAACATGTAAGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCCTCAAGGGAGAACTCTCTTTTTGGAGGAGAAGGTGGCATCACTGAGAAACCCATAGACCCTGTCAAGGTATATTCAGATAAGGAGTTAATCAGGGAAATTGAGAAGATTGCATCTACCCTTGTGCCTGAAAAAGACTGGTCAATTCGAATTGCTGCTATGCAGAGAGTTGAAGGTCTTGTTCTTGGAGGTGCTACGGATTATCCATGTTTTCGTGGGCTCCTGAAGCAACTTGTTGGACCTTTAAGCACACAATTGTCAGACCGAAGATCTACCATTGTGAAGCAGGCTTGCCATCTATTGTGCTTTTTGTCAAAGGAACTCTTGGGTGATTTTGAGGCATGTGCTGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATTAAAACGATGCTGCGCAATTGCAAAGTTGCTCGTGTGCTTCCCCGTATAGCTGATTGTGCAAAAAATGATCGCAATGCAGTACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGGTCCTAGAACATTGGCCTGATGCACCAGAAATACATCGATCAGCTGATTTATATGAGGATCTGATAAAGTGTTGTGTTTCAGACGCTATGAGTGAGGTACGGTCTACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCTCGTCGCCTATTTTCATCCTTTGACCCTGCTATTCAACGGTTAATAAATGAAGAGGATGGAGGAATACATCGGCGACATGCTTCACCTTCCATTCGAGAAAGAGGTGCACTGACTTCATTACCTAGTCAAGCCTCCGCTCCCTCTAATCTACCTGGTTATGGTACTTCTGCTATTGTTGCGATGGATAGAAGTTCAAGTATATCATCAGGGACATCTATCTCATCTGGCATACTTCTTTCACAAGCTAAGTCACTTGGTAAGGGTACAGAACGTAGTTTGGAAAGCATGTTACATGCAAGCAAACAGAAGGTTTCTGCTATTGAAAGCATGCTTAGAGGATTGGATTTGTCTGATAAGCATAATTCATCTTCTCTCCGGTCAACAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCTTTCCCTGCGGCTGTCCCTGCATCTAATCATCTGACAAGCTCTTTAACAACAGAATCAACTGCTTCTGGCATCAATAAAGGTAGTAACCGAAATGGTGGTCTCGGTTTGTCTGACATAATCACTCAGATTCAAGCTTCGAAAGATTCTGCCAAGTTATCCTATCGTAACAATGTTGGTATCGAGCCTTTATCATCATTATCATCATATTCAAGTAAAAGGGCCTCTGAAAGATTACAAGAAAGAAGGTCTCTTGATGATAACAGTGATATTAGGGAGGCTAGGCGATTTATGAACCACAACACTGATAAGCAGTATTTGGATGCCCCTTATAGGGATGGAAACTTTAGGGAATCACATAATAGTTATGTGCCTAATTTCCAGAGACCACTTTTAAGAAAGAATGTGGCTGGACGTATGTCTGCTGGCAGGAGGAGGAGTTTTGATGATAATCAGCTGTCTCTTGGAGAGATGTCAAATTATGTAGATCGACCAGCATCTCTTCATGAAGCTTTGAGTGAAGGACTCAGTTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCCTTTAATTATCTCCATTCTTTGTTGCAGCAAGGTCCAAAGGGAACTCTAGAAGTTGTTCAGAATTTTGAGAAGGTGATGAAGTTGTTTTTCCAGCACTTGGATGATCCCCATCATAAAGTTGCACAGGCTGCTCTTTCAACACTTGCGGATATTGTTCCAGCATGCCGAAAGCCTTTTGAGGGTTACATGGAAAGAATTTTACCCCATGTGTTTTCTCGGTTAATTGACCCTAAAGAACTTGTCAGGCAGCCATGTTCAACAACTTTGGAAGTTGTCAGCAAAACTTACAGTATAGATTCTCTCTTACCTGCATTATTACGCTCACTAGATGAACAAAGGTCTCCAAAGGCTAAATTGGCTGTTATTGAATTTGCAATCAATTCCTTTAACAAACATGCTATGAATCCAGAAGGTGCTGCTAATATTGGCATCCTAAAATTATGGCTTGCCAAGTTAACCCCTTTGGTTCATGACAAAAACACAAAGCTTAAAGAAGCAGCTATTACTTGCATTATATCAGTGTACTCTCACTTTGATTCGACTGCTGTTCTTAATTTCATTCTGAGTTTGTCAGTTGAAGAACAAAATTCCTTGAGACGAGCATTGAAACAATACACCCCTCGCATTGAAGTAGACCTAATAAACTATCTGCAGAACAAGAAAGAGAGACAGCGTTCTAAGTCTTCCTATGATCCATCTGATGTTGTGGGAACATCCTCTGAAGATGGATATGTTGGTTACTCTAGGAAGGCTCATTACCTTGGAAGGTATTCTGCTGGTTCCCTTGATGGTGATGGTGGCAGGAAATGGAGTTCCCAAGATTCAACACTGATGAAAGCCAGTCTTGGTCAAGCATCTTCTGGTGAAACTCGGGAACATCTATATCATAATTTTGAGACTGATCCTAGTAGTGGTAGTCTTGGCTCAAAAACTAAGGATCTTGCTTATGCAGTCAATCCAATGGGTCAAAACTTTGGCTCTCAAACTAGCCCACATGGACATGTGGACAGTAGCATGAACTTAGAGGGTCTTTCAACTCCTCGTCTAGATGTAAACGGTTTGATGTCACCAGAGCATTTAAATGTTGCTGAAGGCTATGTAAATGACAAAGAGCATCCTTCTGAATTGGAACTTAATCATCACTCAGCTGAAGATGAAAAAATTAACTCCATGACAGACACAGGACCCAGCATTCCTCAAATTCTTCATATGATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGTAAACAGACTGCACTTCAACAATTAGTTGAAGCTTCTATAACAAATGATCATTCTGTTTGGACCAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAGTCAAAGAGCTTGCTCTTTCGCTGATAGTTGAAATGCTTAAAAACCAGAAAGGAGCCATGGAGAATTCTGTTGAGATTGTAATTGAGAAGCTGCTTCATGTTACAAAAGATATCATTCCCAAGGTCTCGAATGAAGCAGAGCACTGCCTGACCATTGTTTTATCTCAGTATGATCCATTCAGATGTTTAAGTGTCATTGTCCCTCTACTGGTTACTGAGGATGAGAAAACACTCGTCATTTGCATAAATTGCTTGACTAAGCTTGTGGGGAGGCTTTCTCAGGAGGAACTGATGGCTCAGTTACCCTCGTTTCTGCCTGCTCTTTTCGAAGCTTTTGGTAACCAGAGTGCAGATGTTCGTAAGACGGTTGTTTTCTGTCTCGTGGATATTTATATCATGCTTGGGAAAGCATTCTTGCCATATTTGCAAGATCTTAACAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGAATCTCACAAGCGAGGACAGGCAAAGCAATTGATGCCGTTCAAGATTAG 4341 0.4354 MEEALELSRAKDTKERMAGVERLHQLLEASRRSLSSSEVTSLVDTCMDLLKDNNFRVSQGALQALASAAVLAGEHFKLHFNGLLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWAHKSWRVREEFTRTVTAAINLFASTELPLQRAILPPVLHLLNDPNPAVREAAILCIEEMYTQAGPQFRDELHRHNLPSSLVKDINARLEGIQPKVRSSDGIPGGYITGEIKHVSVNPKKSSPKAKSSSRENSLFGGEGGITEKPIDPVKVYSDKELIREIEKIASTLVPEKDWSIRIAAMQRVEGLVLGGATDYPCFRGLLKQLVGPLSTQLSDRRSTIVKQACHLLCFLSKELLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYALLVLEHWPDAPEIHRSADLYEDLIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPAIQRLINEEDGGIHRRHASPSIRERGALTSLPSQASAPSNLPGYGTSAIVAMDRSSSISSGTSISSGILLSQAKSLGKGTERSLESMLHASKQKVSAIESMLRGLDLSDKHNSSSLRSTSLDLGVDPPSSRDPPFPAAVPASNHLTSSLTTESTASGINKGSNRNGGLGLSDIITQIQASKDSAKLSYRNNVGIEPLSSLSSYSSKRASERLQERRSLDDNSDIREARRFMNHNTDKQYLDAPYRDGNFRESHNSYVPNFQRPLLRKNVAGRMSAGRRRSFDDNQLSLGEMSNYVDRPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGTLEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHAMNPEGAANIGILKLWLAKLTPLVHDKNTKLKEAAITCIISVYSHFDSTAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLINYLQNKKERQRSKSSYDPSDVVGTSSEDGYVGYSRKAHYLGRYSAGSLDGDGGRKWSSQDSTLMKASLGQASSGETREHLYHNFETDPSSGSLGSKTKDLAYAVNPMGQNFGSQTSPHGHVDSSMNLEGLSTPRLDVNGLMSPEHLNVAEGYVNDKEHPSELELNHHSAEDEKINSMTDTGPSIPQILHMICSGGDGSPISSKQTALQQLVEASITNDHSVWTKYFNQILTVVLEVLDDSDSSVKELALSLIVEMLKNQKGAMENSVEIVIEKLLHVTKDIIPKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQDLNSTQLKLVTIYANRISQARTGKAIDAVQD 1446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02943 1446 MobiDBLite consensus disorder prediction 243 267 - -
Pumo5g02943 1446 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Pumo5g02943 1446 FunFam Protein peg1 266 513 - -
Pumo5g02943 1446 Gene3D - 797 1021 IPR011989 -
Pumo5g02943 1446 Gene3D - 268 506 IPR011989 -
Pumo5g02943 1446 SUPERFAMILY ARM repeat 289 1436 IPR016024 -
Pumo5g02943 1446 Pfam CLASP N terminal 284 500 IPR024395 -
Pumo5g02943 1446 Pfam CLASP N terminal 803 997 IPR024395 -
Pumo5g02943 1446 MobiDBLite consensus disorder prediction 635 661 - -
Pumo5g02943 1446 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Pumo5g02943 1446 MobiDBLite consensus disorder prediction 695 714 - -
Pumo5g02943 1446 MobiDBLite consensus disorder prediction 246 261 - -
Pumo5g02943 1446 SUPERFAMILY ARM repeat 8 402 IPR016024 -
Pumo5g02943 1446 SMART TOG_3 784 1030 IPR034085 -
Pumo5g02943 1446 SMART TOG_3 270 514 IPR034085 -
Pumo5g02943 1446 SMART TOG_3 3 224 IPR034085 -
Pumo5g02943 1446 SMART TOG_3 1202 1438 IPR034085 -
Pumo5g02943 1446 PANTHER CLASP 32 1432 - -
Pumo5g02943 1446 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Pumo5g02943 1446 Gene3D - 1229 1438 IPR011989 -
Pumo5g02943 1446 Gene3D - 1 221 IPR011989 -
Pumo5g02943 1446 MobiDBLite consensus disorder prediction 602 661 - -
Pumo5g02943 1446 MobiDBLite consensus disorder prediction 602 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02943 Pumo-Chr5 77019005 77037947 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02943 K16578 - gmx:100796697 2652.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02943 5 77019005 77037947 Pumo5g02943 5 77019005 77037947 ECH
Pumo5g02943 5 77019005 77037947 Pumo3g02551 3 38545518 38546740 PCT