Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02942 ATGAAAAAACAAAAACAAAAAATAATAGTTTTTGCGTTGACCGTAGTAAGCGTGAATTGCTGTTGTGTGGTTGGGCAGTGTGCGATGGCGCAGGCTCCGTCGTCGCTCATTTCTCTGTGCATCGACGCTCTCAAACAACAACTTCTCCGTGCAAGCGATGATCTTCTTCCCTCCTTATTCGACCTTCCTTCTCACTTACTTGACACCTTAATCACGCGTTTGCCCCCTTTCGCACTGCGCACATTCCACCATCACCTGCCATTCGACGAGGAAGGGTTTTCTCACGACGACTCCACCAAAAAGAGAAAACGCGCAAGGGATTGGAATCTGAATTCAGCTTGGCAGAGGTTGTTTCAGCAACGCTGGCCTGATCGCGTTAAGCAGATTCAGCCAACGGATTGGCAGCAACTCTATTGGGAAACTCATTTGCAAGATTGTTTAGATGAAGCGGCGGAGGTAGCACTAATTCCAGCTTTTAATGGATATATTGGTGACATTCAGATTTCAGACAGCATACTGAAATATATTGGCTTTGTGGGGAATACAAGCCAGTCAACTTGTGACCATTCAAAATTGTCTTACCATTGCCTACAATTTGGCAGCCATGTCAGTTGTCTGAGGCTGCAAAATGTTCTATGTACTGCAGAAACTAGTGTTTTGTTGAGGGAATGCAAGCTACAGAGTCTGGTACTAAGATGTATCAGATCCAAGGAACAAATTGATGGATTATGCAAACTTCTTGCTCAACATTGTAGAACGTTAACGTCTCTGGAATTTGTTCACTGCACACTCTCAACAGATTTTATTAATGCAATATTTAGTTCTTTAGTCATAGAGAGAGTACAAAAACATGGGATCCAACATTTGTCAATCATCGCCACAAGTTTTCTGGAACAATGCACAGTTTCTTTACCTAGTGGACTTGTGTCATTTTTGTCTTCAGGAAGGTCCTTGTGCTCATTAAAATTATCTGACAACCACCATGGACGGACTTTTGCCAAAGATCTTTTTGTGACTCTTCTCGATCTTTCATCTGGCATATCTGTCATTGACCTTTCTGAGAATAGAATAGCAGGATGGCTTTCTGACTTTAACAGGAGATCCTTGAGTGGTTCACATCTGTCTTTTAGAAATGGAAAGTCCTTGAAACTGTTGCGTGTACTCAATCTGAGGGAAAACAATTTAGGAAAAGATGATGCAGAAAGTCTTAGATATGCTCTTGAACATGTGCCTAACTTGGAGGAGCTGGATATAAGTGACAATTCAATTGAAGATGAAGGAATCAGGAATTTAATTCCCTATTTCGTTGGAGCATCTGAAACATGTCCTCACATAACTTGTTTGAAATTAGAGAACTGTGATCTGTCTTGTGTTGGAGTGAATCATCTCCTACATGTCCTTTCTACTTTCAAAGGACCATTAAAGTCTCTTTCTATTGCTGACAATTACCTTGGCAGTCAAGTAGCTGAAGCATTGGGAAAATTTTTGAGCACCCCAATCGAAGTACTTGACATTTCAGGCATTGGATTGGGTTCTTACGGTTTTCAAGAGCTTCAAAGTCTAATAAAAGAGGAGATTAAGCTGATGAAAATTAATATAAGCAAAAATCGTGGTGGGATTGAAACTGCCAAATTTTTGTCCAAACTCTTGTCACAGGCTCCACAACTAGTTGATGTGAATGTAGCCAGTAATCTTATGCCAATAGAATCACTGGCCATCATCTCCTCCGCATTAAAGTTTGCGAAAGGTAATGTTCAGCAAGTGGACTTGACAGGACATATATGGGACTATAAGCCAGAGCATGTTTCCCCTTACACTGAATTTGTACATAATGGATTACCTATATTGGTTCTTCCATCATCATCAGCCTCTGCTGCACCTCACGACCATGATCCTTAG 1899 0.4113 MKKQKQKIIVFALTVVSVNCCCVVGQCAMAQAPSSLISLCIDALKQQLLRASDDLLPSLFDLPSHLLDTLITRLPPFALRTFHHHLPFDEEGFSHDDSTKKRKRARDWNLNSAWQRLFQQRWPDRVKQIQPTDWQQLYWETHLQDCLDEAAEVALIPAFNGYIGDIQISDSILKYIGFVGNTSQSTCDHSKLSYHCLQFGSHVSCLRLQNVLCTAETSVLLRECKLQSLVLRCIRSKEQIDGLCKLLAQHCRTLTSLEFVHCTLSTDFINAIFSSLVIERVQKHGIQHLSIIATSFLEQCTVSLPSGLVSFLSSGRSLCSLKLSDNHHGRTFAKDLFVTLLDLSSGISVIDLSENRIAGWLSDFNRRSLSGSHLSFRNGKSLKLLRVLNLRENNLGKDDAESLRYALEHVPNLEELDISDNSIEDEGIRNLIPYFVGASETCPHITCLKLENCDLSCVGVNHLLHVLSTFKGPLKSLSIADNYLGSQVAEALGKFLSTPIEVLDISGIGLGSYGFQELQSLIKEEIKLMKINISKNRGGIETAKFLSKLLSQAPQLVDVNVASNLMPIESLAIISSALKFAKGNVQQVDLTGHIWDYKPEHVSPYTEFVHNGLPILVLPSSSASAAPHDHDP 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02942 632 Gene3D Ribonuclease Inhibitor 361 599 IPR032675 -
Pumo5g02942 632 ProSiteProfiles Leucine-rich repeat profile. 412 432 IPR001611 GO:0005515
Pumo5g02942 632 SMART LRR_RI_2 410 437 - -
Pumo5g02942 632 SMART LRR_RI_2 442 469 - -
Pumo5g02942 632 SMART LRR_RI_2 382 409 - -
Pumo5g02942 632 SMART LRR_RI_2 471 498 - -
Pumo5g02942 632 Gene3D Ribonuclease Inhibitor 165 359 IPR032675 -
Pumo5g02942 632 SUPERFAMILY RNI-like 202 596 - -
Pumo5g02942 632 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 31 632 - -
Pumo5g02942 632 Pfam Leucine Rich repeat 411 430 IPR001611 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02942 - - gmx:100817679 1065.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02942 5 77004156 77010523 Pumo5g02942 5 77004156 77010523 ECH