Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02932 ATGGAGAATCCTTGTGAGGTGCTTGGTTCCAAAGGGTTGATTAGAAGGCATGAATTCGTGAGGATCATAATTCAGTGTCTATATTCATTAGGGTACAGTAACTCTGCGTCGTGTTTGGAATCAGAATCTGGTGTTTCGTACAAGTCCAATGAGGTTAAGTTGCTTGAATCAGTTATTTTGAACGGGAATTGGGACGAAAGCATTGATTATCTTAATTCCATACAGGATGTGTTGGGTGAAACCAGGGAATCTGCCCTGTTTCTTGTGTTCAGACAGTGTGTTATGGAGTATTTGAATTGCGGCGAGGATGCCTTAGGCTTTAGGGGTGTTGAGGAAACAGGTTTCTGCCTCGGATGTGGACAAATGCAAAGTTCACAGCTTGGCTAA 387 0.4289 MENPCEVLGSKGLIRRHEFVRIIIQCLYSLGYSNSASCLESESGVSYKSNEVKLLESVILNGNWDESIDYLNSIQDVLGETRESALFLVFRQCVMEYLNCGEDALGFRGVEETGFCLGCGQMQSSQLG 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02932 128 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 48 105 IPR006595 -
Pumo5g02932 128 SMART ctlh 48 105 IPR006595 -
Pumo5g02932 128 ProSiteProfiles LIS1 homology (LisH) motif profile. 15 47 IPR006594 GO:0005515
Pumo5g02932 128 SMART Lish 15 47 IPR006594 GO:0005515
Pumo5g02932 128 PANTHER WD REPEAT PROTEIN 26-RELATED 3 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02932 Pumo-Chr5 76808350 76808736 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02932 K22382 - gmx:100818922 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02932 5 76808350 76808736 Pumo5g02932 5 76808350 76808736 ECH