Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02927 ATGGCGGATTTAGAAAATTTGCTTTTGGAGGCGGCGGGGAGAACACGACACTCTCGTCCACCTTCAAGAAGAGGACATGGTGGTGGTGGGAGTGACTCTAGGGAGGATGATTCGGATGATGAACATGATTATCCGTGCCGAATGCCCTCTAGCTCGCAAGTTCCCCTAAAGAAGAGATTTGATCCAATGGAAAGAGATGGTGATGAGAGAAGTCGGGCTGAAGGGGATGATGATGTTCATGGCCGATCCTATCACGAGGGTGATAGCAGTGATGAATCTGATTTTGGTGATGATCTTTATAAGAATGACGATGACAGGCGTAAGCTTTCTGAGATGACTGAACTTCAAAGAGAGATGATATTGTCAGAAAGGGCTACCAAGAAGCATGATAAAGATTTATTGGGGAAGATAGCATCGAAGCGTGAGAAGGGAAAGACAACTGTTGCCGGGAAACAGACTTCACCTCTCCCGCCATCTCGTGTGCGTTCATCAGCCAGATCTGCTGACAGGTCAAATGCCAAGGATGGTGCATTAAATGAATTGCGTGCGAAACGATTAAAGCAGCAAGATTCAGAAGCAAACCGCAGGCCAAGTGAGGCATCTAGAAGTTCAGGGCCTGGGCATGTTTCACCAAAGTGCAAACCTTTCCCAAGTCTCAGTAGCCCAAGTGATAGTGAAAGTAGGTCCCTGAGTGATAATGAAGGGTCTAGTGATGACGACAGAATCATTGACAGTGATGATGACAGGATAATGTTAGGATCTGAAGGGCTTTCATTTGAGGATATAAAAGAAATCACCATTCGGAGGTCAAAACTTGCAAAATGGTTTATGGAACCCTTTTTTGAGGAGTTAATTGCTGGTTGTTTTGTAAGAGTTGGTATTGGCAGCTCAAAGTCAGGGCCTATCTACAGGCTCTGCATGGTAAAAAATGTTGATGCCACAGATCGTGATCGCCAGTATAAATTCGAAAATAAAACCACACACAAGTACTTAAATCTTGTCTGGGGAAATGAAACTTCTGCTGCAAGGTGGCAAATGACTATGATTAGCGACTCTCCTCCAAAGGAGGAGGAGTTCATCCAGTGGGTTAAGGAAGTAGAGCGAAAAGGTGGCCGGATGCCAACAAAGCAAGAAGTGGTAGAAAAAAAACAAGCTATACAAAAGACCAATTTGTTTGTTTACTCAGCAGCTACTGTGAAGCAGATGTTACAAGAGAAAAAATCTGCCAAAACAAGACCGCTAAATATTGCAGCTGAGAAGGATCGGTTAAGGACGGAATTGGAAATAGCACATGATAAGCATAATAAAGCTGAAGTGAAGAGGATCATGACAAGATTGCAAGAATTGGAAGAATCTCGGGGAGCTAAGAAGATGGATGCCAGGGCTTTGAAGCTTGCTGAGATGAATAGAAAGAACAGGTTTGAGAACTTCAAAAATGCTTCTGAATTGAAGCCAGTAAATAAAGAATTGAAAGCAGGGGAGGCAGGTTATGATCCCTTTTCAAGGAGATGGACTAGATCAAGGAATTACTACGCTGCAAAACCAGCTGAAAATAATAGTGCCGATGGTGCAGTGGCTGATACAGGCAGCTATCGGACAGGAGCAGCTGAGACAGTGACAGCTGGCGTGGTGGCTACTGCTGCAGCTTTGAAAGCTGCTGCCGGTGCTGGGAAGTTAGTAGACACAAGCGCTCCGGTGGATCAAGGGACAGAGTCAAATGTGCTGCACAATTTTGAGCTGCCAATATCATTAGTTGTGCTCCAAAAGTTTGGTGGAGCCCAAGGAGTTCAGGCAGGATTGATGGCAAAAAAACAAAGAATAGAAGCAACAGTTGGATTTCAAATCCTGGAAAACGATCGTGGGAAGAAGCATGCGCTGACATTGACAGTTAGTGATTACAAGAGAAGAAGAGGGCTTCTTTGA 1923 0.4451 MADLENLLLEAAGRTRHSRPPSRRGHGGGGSDSREDDSDDEHDYPCRMPSSSQVPLKKRFDPMERDGDERSRAEGDDDVHGRSYHEGDSSDESDFGDDLYKNDDDRRKLSEMTELQREMILSERATKKHDKDLLGKIASKREKGKTTVAGKQTSPLPPSRVRSSARSADRSNAKDGALNELRAKRLKQQDSEANRRPSEASRSSGPGHVSPKCKPFPSLSSPSDSESRSLSDNEGSSDDDRIIDSDDDRIMLGSEGLSFEDIKEITIRRSKLAKWFMEPFFEELIAGCFVRVGIGSSKSGPIYRLCMVKNVDATDRDRQYKFENKTTHKYLNLVWGNETSAARWQMTMISDSPPKEEEFIQWVKEVERKGGRMPTKQEVVEKKQAIQKTNLFVYSAATVKQMLQEKKSAKTRPLNIAAEKDRLRTELEIAHDKHNKAEVKRIMTRLQELEESRGAKKMDARALKLAEMNRKNRFENFKNASELKPVNKELKAGEAGYDPFSRRWTRSRNYYAAKPAENNSADGAVADTGSYRTGAAETVTAGVVATAAALKAAAGAGKLVDTSAPVDQGTESNVLHNFELPISLVVLQKFGGAQGVQAGLMAKKQRIEATVGFQILENDRGKKHALTLTVSDYKRRRGLL 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02927 640 MobiDBLite consensus disorder prediction 28 46 - -
Pumo5g02927 640 Gene3D - 257 389 IPR036128 GO:0003677
Pumo5g02927 640 Pfam Plus-3 domain 261 366 IPR004343 GO:0003677
Pumo5g02927 640 SUPERFAMILY Plus3-like 258 388 IPR036128 GO:0003677
Pumo5g02927 640 MobiDBLite consensus disorder prediction 1 103 - -
Pumo5g02927 640 PANTHER UNCHARACTERIZED 220 639 - -
Pumo5g02927 640 MobiDBLite consensus disorder prediction 167 197 - -
Pumo5g02927 640 MobiDBLite consensus disorder prediction 148 166 - -
Pumo5g02927 640 MobiDBLite consensus disorder prediction 119 247 - -
Pumo5g02927 640 ProSiteProfiles Plus3 domain profile. 256 391 IPR004343 GO:0003677
Pumo5g02927 640 SMART rtf1 256 368 IPR004343 GO:0003677
Pumo5g02927 640 MobiDBLite consensus disorder prediction 58 103 - -
Pumo5g02927 640 MobiDBLite consensus disorder prediction 119 147 - -
Pumo5g02927 640 MobiDBLite consensus disorder prediction 216 230 - -
Pumo5g02927 640 FunFam RNA polymerase-associated protein RTF1 257 389 - -
Pumo5g02927 640 MobiDBLite consensus disorder prediction 231 247 - -
Pumo5g02927 640 Coils Coil 420 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02927 Pumo-Chr5 76775784 76778057 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02927 K15178 - gmx:100817324 967.607