Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02925 ATGGAATCAAAAGAAGAGGCTGAACCTAATGAGGACAGGCCCTCGTCGCCAATGCGGGTCCTGCAGCAGTTATCTGAAGGGGCATTCAGAGTTGCTGGGGAAGCATTTCAAAATATGTATTCTGGTGGTGGGTCAAGCATGCCACAAATGGGGCCTGGTGCACATAGACGTACTCAAAGTGAACTTGTTACTAGAGGAGTTCAGCGTACTAATAGCTTTCATAAATTAAAATCTCATGTGCACAGGGCTTGGCGGTGGGGTGGCAGATTCCGTGAAGAAGTTTCCCCGGCGAGTTTCAACCCTGAGGTCATGGCAAACCAGAAACGGCAGTGGTATCGGCTTCATCCTAAAAGTCCGGATTGTGTACATTATAAGGAGCCAACATCGCTCTTTGAACATTTTGTGATTGTGGGGCTGCATCCAGATGCTAATTTGGAAACCGTGGAGGATGCATTTGCAAGAAGGAAGAAGTGGGAAAGGGAAAAACCTGATTTTCCAGATTACAAAACGCTGAAGCAACAAAGGCCACCAGAACCAATTTTGGAACCTCAGTTACTGTTCAAATACCCTCCTGCAAAGAAGCTAACAATGCGTATGAAGGATTTAGCTCCCTTTTGCTTTCCTGAAGGTGTTAAGGCATGGTTGTTGGAGAGGACTCCATCTCTAAGTGACCTAAATGAACTTGTCTATGGACAGGAGCATTTAGGAAAAGATGATCTTTCATTTGTCTTTACAGTCAAGGCAGCAGACAATACAACACTTTATGGAGTTTGCTTACATGTGCCTGAAATTGTTCAGAGGCCCCCTGGTATCTTAGGCATATCATCTCCTTTTTCTCATCCCTCTGGGGCATGCAGCCGTTTTCTGGTTTCTGCACCTCGCTGTTACTGTCTTCTGACTAGAGTTCCTTTCTTTGAGTTACACTTTGAGATGTTAAACAGTCTCATTGCACAGGAGCGCCTGAATCGGATAACTCAGTTTATAAATGAGGCGACTCTCACTGGCAGCATTCCATCATCACCCAAACTAGATGATCTAATGAGTTCAAATGCTAACTCCCCGGATAGGGAGTCATTTAGTGACTGGATGGATTGTGCAATACCTCTTGATGGTGCAGCTGTTATTACTGCTGCTGCTGCTGGGATTATATCTGATGATGAAATCCCACAGTTATCACCTAAAAGATGGGATTCTCGCTGTCAATCTCCTGTAAGTGTGACTGCCAGTGATGCTTCAGATTATTGGCAGGTTAGGGATATAGACAAGGATGGCAGGAAGAATCTGCAAGATCATGATAATCGTGCTTTTGAGGCACCAGAAACTCTTGGTTCTATACGAAGAATGCATGGAAATTGCGAAAATGACCAAGTTTCTCCGAAAGTTGGAACACCTTTTTCTGCTCGGAGTCGTGTCTTGGAGCGTCTTGGAAGTTCCGAATCACTTTTCAGTCCAGTTAGAAGCATGGCATCAGAAGATGAGGACGATTTTTTCACAAACAATGATAGAGATTATGGGGACGAATTGTTAATGGAATGGGCCATGGAGAATAAGAATGATTTGCTACAGATAGTGTGTAGATATCATGCTCAACCTATTCCACCTCGAGGAAGTGAATTTGTCTTCCACCCTCTCGAACATCTACAAGCTATTCAGTACATACGACATTCAGTTGCTGCTCTTGGCTTCGGCGATGATTGTTCAAATTGTTCTGAACTAGTTCAGGACAATACGAAGCTAGCAGCTGCTGAGGAAGCCCTAGCACTATCAGTATGGACAATGGCAACTACTTGTCGAGTTCTGTCCCTTGATAGTGTGCTGGCATTAATTACAGGAGTGTTGTTGGAAAAACAGGTGGTAATAGTGTGCCCAAATCTGGGTGTTCTATCTGCCACAGTGCTTTCTCTTATTCCCATGATTCGTCCATTTCAGTGGCAGAGTTTATTGCTCCCGGTTTTACCTGGGAAAATGATTGATTTTCTTGATGCCCCAGTTCCATATATTGTTGGCATACAACATAAACCAGATGACTTGAATATGAAAACTAATCTTGTTCTTGTTAATATACCGAAGAATCAGGTTACAATGTGTCACTTACCAAGACTTCCACAACATAGAGAGCTTCTCTCTCAGTTGGGTCCAATTCATGCTAGACTTTCAAATGAAAGATCAATTGCTAGAAAGCATCCTGTACATAGGTGTAACGAAGTCCAGGCTGAAGCTGCAACTCAGTTTTTGAATATAATGTGGCACTTTTTGGAGTCACTTTGTTCAGATCTGAAATCCCACACGATAACTAGTGTACAATCAAATAACGACAGGGTTTCTTTACTTCTTAAAGATAGCTTCATTGATTCCTTTCCTGCTAGGGACCAGCCATTCATTAAGCTATTTGTAGATACACAGCTCTTCACAGTTTTATCAGACTCTCGTTTGTCAAGCTTTGAGAGTGGCGAGTCATAG 2460 0.4313 MESKEEAEPNEDRPSSPMRVLQQLSEGAFRVAGEAFQNMYSGGGSSMPQMGPGAHRRTQSELVTRGVQRTNSFHKLKSHVHRAWRWGGRFREEVSPASFNPEVMANQKRQWYRLHPKSPDCVHYKEPTSLFEHFVIVGLHPDANLETVEDAFARRKKWEREKPDFPDYKTLKQQRPPEPILEPQLLFKYPPAKKLTMRMKDLAPFCFPEGVKAWLLERTPSLSDLNELVYGQEHLGKDDLSFVFTVKAADNTTLYGVCLHVPEIVQRPPGILGISSPFSHPSGACSRFLVSAPRCYCLLTRVPFFELHFEMLNSLIAQERLNRITQFINEATLTGSIPSSPKLDDLMSSNANSPDRESFSDWMDCAIPLDGAAVITAAAAGIISDDEIPQLSPKRWDSRCQSPVSVTASDASDYWQVRDIDKDGRKNLQDHDNRAFEAPETLGSIRRMHGNCENDQVSPKVGTPFSARSRVLERLGSSESLFSPVRSMASEDEDDFFTNNDRDYGDELLMEWAMENKNDLLQIVCRYHAQPIPPRGSEFVFHPLEHLQAIQYIRHSVAALGFGDDCSNCSELVQDNTKLAAAEEALALSVWTMATTCRVLSLDSVLALITGVLLEKQVVIVCPNLGVLSATVLSLIPMIRPFQWQSLLLPVLPGKMIDFLDAPVPYIVGIQHKPDDLNMKTNLVLVNIPKNQVTMCHLPRLPQHRELLSQLGPIHARLSNERSIARKHPVHRCNEVQAEAATQFLNIMWHFLESLCSDLKSHTITSVQSNNDRVSLLLKDSFIDSFPARDQPFIKLFVDTQLFTVLSDSRLSSFESGES 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02925 819 MobiDBLite consensus disorder prediction 1 20 - -
Pumo5g02925 819 SMART DENN_cls 291 691 IPR001194 -
Pumo5g02925 819 Gene3D - 120 340 - -
Pumo5g02925 819 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 57 814 - -
Pumo5g02925 819 SMART uDENN_cls 127 262 IPR005113 -
Pumo5g02925 819 Gene3D - 589 761 IPR043153 -
Pumo5g02925 819 SMART dDENN_cls 737 810 IPR005112 -
Pumo5g02925 819 Pfam uDENN domain 183 261 IPR005113 -
Pumo5g02925 819 Pfam DENN (AEX-3) domain 589 690 IPR001194 -
Pumo5g02925 819 ProSiteProfiles Tripartite DENN domain profile. 164 817 IPR037516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02925 Pumo-Chr5 76747623 76756777 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02925 - - gmx:100814487 1528.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02925 5 76747623 76756777 Pumo5g02925 5 76747623 76756777 ECH