Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02917 ATGGTGTTGCGACTCTATGGATTGGAAGGTCTGCGAAGTCACATAAGAAACCACATTGAGCTGGCTGCTTACTTTATGGAGCTTGTATGTCAGGACACAAGATTCAAGGTCGTTGCACCTCGCACGTTCTCTTTAGTTTGTTTTCGGCTGTTGCCCCCTCCCAATTCTGAAGATTATGGGAATAAGCTAAATAGTGATCTCCTCGACTCAGTAAATTCAACAGGAAATGCTTTCATAACACACACGGTTCTATCTGGTGAGTACATTCTACGTTTTGCAGTAGGAGCACCATTGACAGAGAGGAGGCATGTCAATATGGCGTGGCAGATTTTGCAAGATAAAGCCACTGCTCTACTTGAGAGTTTGTAG 369 0.4417 MVLRLYGLEGLRSHIRNHIELAAYFMELVCQDTRFKVVAPRTFSLVCFRLLPPPNSEDYGNKLNSDLLDSVNSTGNAFITHTVLSGEYILRFAVGAPLTERRHVNMAWQILQDKATALLESL 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02917 122 PANTHER GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE 1 121 - -
Pumo5g02917 122 Pfam Pyridoxal-dependent decarboxylase conserved domain 2 50 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pumo5g02917 122 Gene3D Aspartate Aminotransferase, domain 1 17 122 IPR015422 GO:0003824
Pumo5g02917 122 SUPERFAMILY PLP-dependent transferases 1 115 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02917 Pumo-Chr5 76492882 76493571 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02917 K01593 - gmx:100791074 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02917 5 76492882 76493571 Pumo5g02917 5 76492882 76493571 ECH