Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02903 ATGGAGCCGCCAACTCCCACTTCCCCGCTATATAAAAGCAGCACCTCACGTTTTATTACCCTACTTCTACTTCTCAAATTCCAATTCTCGATTTACCACCAGAAACAGCCACCCGAGGTTTCAATTTTGCTGAGAAACAAAGAAAGGCTCAATCTCTTCTCCGCGACGACGCCATTTCTCTCCCTTGAGGTAAAGAACTTTAATTCAAGCATGGGAGATAGCGAACCGGTGGTTACTGAAGCATCTGCTGCTGAGGCATATGCTTCGGCTGGTTATGCCGAGACTGGGTCGAATCCTGCTCCTGAGGCAGGTGCTAATGTTGATCAATCTGCTGGAGAAGCTGCTCAGGCCTCTTCAACTTATGGATTTGGTTATTCTAATGTCGGTGATGCGAATGCGTATGCTGGGGATCCGAATTCTGTCCTACAACAAGCTCAGTTCAGTGCAGCTGGTGATTCCAAGCCAGCTGGTGGAGTAGCTGATGCTAACGAGGCCTCTGCTGGGGTTGGAAGCACAGCTGCCGAGCCTACTATGGTTTCCGACTACAATTCATCCGTAAATGGTGGTGTTGGTGGTGCAGTGGCAAATGCTGCAGGACTTGAAAATGGGAATGTGTTGGAGAATGTTGATGGGTCAGCTGATGAGAAACAGCTTGCAGATGGTTATGCTGCCTTGTCTGCTGAAGAAGATCGACTTTGGAATATTGTAAGAGCTAATTCTTTAGATTTCACTGCCTGGACTTCCTTGATTGAAGAGACAGAGAAGGCAGCAGAGGACAATATTTTGAAGATTCGAAGAGTCTATGATGCTTTTCTAGCAGAATTTCCCTTGTGCTATGGTTATTGGAAGAAATATGCTGACCATGAGGCACGTCTTGGCTCTATTGATAAAGTTGTTGAAGTGTACGAGCGTGCTGTTCAAGGGGTTACATATTCAGTGGACATGTGGTTGCATTATTGCATATTTGCTATAAGCACGTATGGGGATCCAGACACTGTTCGTAGGCTTTTTGAACGAGGATTAGCTTATGTTGGAACAGATTATCTTTCTTTTCCCCTCTGGGATAAATACATTGAATATGAATACATGCAGCAAGACTGGGCCCGCCTTGCCATGATCTACACCAGAATATTAGAGAATCCAAATCAGCAATTAGATCGGTATTTCAGCAGCTTCAAAGAGTTAGCTGGAAATCGACCTTTGTCAGAGTTACAAACTGCTGATGAGGCTGCTGCAGTGGCAGGTGTTGCTTCAGAGGCTACTGGCCAAGCTGTTGAGGGAGAGGTTCATCCTGATGGTGCAGAGCGTTCTCCTAAATCTGTAAGTGCTGGCTTAACAGAAGCAGAAGAGTTGGAGAAGTATATCGCCATTAGAGAAGAGATGTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGGAGGCCCTACTTTCATGTACGGCCCCTCAATGTTGGAGAGCTTGAGAATTGGCATAACTATCTGGACTTTATAGAAAGGGAAGGTGACTTAAGCAAGATTGTCAAGTTGTATGAGAGATGTGTCATTGCATGTGCCAATTATCCCGAGTATTGGATACGCTATGTTTTGTGTATGGAAGCCAGTGGAAGCATGGATCTTGCAAATAATGTTCTTGCTAGAGCAACCCAAGTCTTTGTCAAGAGACAACCAGAGATACATCTTTTTTGTGGTCGGTTCAAGGAGCAGACTGGAGATATAGATGGTGCTAGAGCTGCGTATCAACTTGTGCATACTGAAACTTCCCCTGGTCTTCTTGAAGCAATAATCAGGCATGCCAATATGGAATACCGACTGGGAAAAATGGAGGATGCCTTCTCTTTGTATGAACAGGCCATTGCTATTGAGAAAGGAAAAGAACATTCACAAACATTGCCAATGTTGTTTGCTCAGTATTCTCGATTTGTATATTTGGCTTCTGGGAATGCAGAGAAGGCAAGGCAGATTCTTGTTGAGGGGCTTGAGAATGTTTTGCTGTCAAAGCCACTACTTGAGGCTTTATTGCATTTTGAGGCTATTCAACCCTTGCCGAAGCAAGTTGATATTGACTTTCTGGAGTCATGGGTTGTCAAATTCATAATGCCTAACTCAGAGAGTCCTGGTGTAGCAACTGCAACTGAGCGTGAGGAACTTTCTAGTATTTTTCTGGAGTTTTTAAATCTCTTTGGAGATGTTCAATCTATCAAGAGGGCTGAGGATAGGCATGCCAAATTGTTTTTGCCACACAGAAGCATGTCAGAGTTGAAAAAACGTCATGCTGAGGATTTCTTAGCTTCTGACAAAACAAAAGTGCAAAGGTCTTATTCTGCCCAATCACCTGCCCAATCTGTGATGGGTGCATATCCAAATGCACAGAACCAGTGGACTAATTATGGAGTACAACCACAAACTTGGCCTCCAGTTACACAAGCACAAGGGCAACAATGGACTGCTGGCTACACCCAGCAGGCTTCTTACGGGGCTTATGCTGGATATGGGGGCAACTATGCAAATTCTCAATTGCCTACATCAGTTCCACAAAGTACTGCATACGGAGCCTATCCTCCAGCATATCCTGCACAGCCGGCGGTTCCTCAACAAAATTATGCACAACCTGTTGCAGCCCCTGCACAGCAACCTGCTGCGGTTCCTCAAGCCTATTACGGGAGTTATTACTGA 2694 0.4473 MEPPTPTSPLYKSSTSRFITLLLLLKFQFSIYHQKQPPEVSILLRNKERLNLFSATTPFLSLEVKNFNSSMGDSEPVVTEASAAEAYASAGYAETGSNPAPEAGANVDQSAGEAAQASSTYGFGYSNVGDANAYAGDPNSVLQQAQFSAAGDSKPAGGVADANEASAGVGSTAAEPTMVSDYNSSVNGGVGGAVANAAGLENGNVLENVDGSADEKQLADGYAALSAEEDRLWNIVRANSLDFTAWTSLIEETEKAAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARLGSIDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLAMIYTRILENPNQQLDRYFSSFKELAGNRPLSELQTADEAAAVAGVASEATGQAVEGEVHPDGAERSPKSVSAGLTEAEELEKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEASGSMDLANNVLARATQVFVKRQPEIHLFCGRFKEQTGDIDGARAAYQLVHTETSPGLLEAIIRHANMEYRLGKMEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKARQILVEGLENVLLSKPLLEALLHFEAIQPLPKQVDIDFLESWVVKFIMPNSESPGVATATEREELSSIFLEFLNLFGDVQSIKRAEDRHAKLFLPHRSMSELKKRHAEDFLASDKTKVQRSYSAQSPAQSVMGAYPNAQNQWTNYGVQPQTWPPVTQAQGQQWTAGYTQQASYGAYAGYGGNYANSQLPTSVPQSTAYGAYPPAYPAQPAVPQQNYAQPVAAPAQQPAAVPQAYYGSYY 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02903 897 MobiDBLite consensus disorder prediction 152 172 - -
Pumo5g02903 897 SMART hat_new_1 508 540 IPR003107 GO:0006396
Pumo5g02903 897 SMART hat_new_1 259 291 IPR003107 GO:0006396
Pumo5g02903 897 SMART hat_new_1 612 647 IPR003107 GO:0006396
Pumo5g02903 897 SMART hat_new_1 653 685 IPR003107 GO:0006396
Pumo5g02903 897 SMART hat_new_1 328 363 IPR003107 GO:0006396
Pumo5g02903 897 SMART hat_new_1 293 325 IPR003107 GO:0006396
Pumo5g02903 897 SUPERFAMILY TPR-like 236 395 IPR011990 GO:0005515
Pumo5g02903 897 Gene3D Tetratricopeptide repeat domain 488 790 IPR011990 GO:0005515
Pumo5g02903 897 Gene3D Tetratricopeptide repeat domain 234 401 IPR011990 GO:0005515
Pumo5g02903 897 FunFam Putative pre-mrna-processing factor 39 234 404 - -
Pumo5g02903 897 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 487 779 - -
Pumo5g02903 897 SUPERFAMILY TPR-like 452 755 IPR011990 GO:0005515
Pumo5g02903 897 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 214 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02903 Pumo-Chr5 76337533 76346591 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02903 K13217 - gmx:100787373 1454.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02903 5 76337533 76346591 Pumo5g02903 5 76337533 76346591 ECH