Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02883 ATGGAAAGGAGAGAGAGTTGTCACCCATTGCTGAGAGGAGTTAGGAGAAGAGAGGAGAAAGGTTACAACCATGGCTTATCCACCTCTCAGATGCATGCCATGGCTGCCATATGTGATGCCCTCTTTCCTTCCCTCCCATTGAACTCACTCAACAAGGACACTTCACAAGACCATGCTCTCTCAGACTTCTACAATACCTCTGCTTCTCAGGTCCCTTTTCCTGATGAGGCTGCTGAGCTGTTGTACAAGAGGGTTGTGCCAGAAGCTGTGTCGTTGGTAAATTGGGTTCTGTGGATACTGTCTTTCAGATTGGGGACACTGTTGCTCTGTGGAAGACTTTGCTTGGACTGGAAGTGGCCTTTCATTCACAAGTTCTCTGAGATTTCATTGGAGAAGAGAGAAGAAATTCTCAGGAACTGGACCAGGGAAAAGAGTTGGGTAGCCCTACGGGTAGTCTTTGTGCTCATCAAACTTGTTTGCTTCTATAATTTCTTCTCAAGGACTGATGCAAATGGGCATAATCCCACATGGAAAGCAATTGGATACGAGGTGGACACCAAGGAGAAGTTGATCCAAAAGGAGAGGCCTCTCGAAAAGGGATTAATAGAGACTATGTACCAAACTGATTCTACTTTAATCCAATCCCTCACTGAAAAAGGCCTTGAAGTCACTGAAGATAAGAGGCAGAACCTATACAAGGTCAAATGTGATGTTGTCATTGTGGGGTCTGGTTGTGGTGGAGGAGTTGCTGCTGCAGTTCTTGCAAACTCTGGTCATAAGGTAATAGTCTTAGAGAAAGGAGAGTACTTCGTTTCCCATGATTATTCTTCCCTGGAAGGTCCATCCATGGATGAGCTATATGAATCAGGTGGCATTATGCCAAGTCTTGATGGGAAGATGATGATTCTAGCTGGCTCAACAGTGGGTGGAGGCTCTGCTATAAACTGGTCTGCATGCATCAGAACACCTGATTCTGTTCTGAGGGAATGGTCTAAAAAACACAAAATTCCACTTTTTGCTAGCTCTGATTATCAGTCTGCCATGGACACAGTGTGCAGAAGGATTGGTGTGACCGCCAAGTGCAAGAAGGAAAGCTTTCAGAATCAGATTCTTATTCAAGGATGTGAGAAAATGGGCTTGAAAGTAGACTCAGTGGCTATAAATTCCTCAGCAGATCACTATTGTGGTTCATGCTGTTATGGTTGTAGAACAGGAGATAAGAAGGGCACTGACACTACTTGGTTGGTTGATGCTGTAGGCAATGGTGCAGTGATCCTCACTGGGTGTAAAGCTGAGAAATTCATACTTGAAGATGGAAAGGGTGGAATGAAGAAAAAGAAATGCTTAGGAGTGATTGCTGCAGCAAGTTGGAGGAGTAAGGTGACAAAGAAACTCCAAATTGAATCCAAGGTAACTATCTCAGCATGTGGCTCTCTCAACACTCCTCCTCTAATGATCTCTAGTGGACTGAAAAATCCGAACATTGGAAGGAATCTCCATCTCCACCCTGTTCAATTTGCATGGGGGTACTTCCCAGAAGACATGACAAACTTCAGTGGCAACAACTATGAGGGTGGAATCATAACTTCAATCCACAAGGAATATGCAGAGGATTCCACCCCAAGATTCATCATAGAAACACCTTCTCTAGGACCAGGATCATTTTCAGCATTTGTTCCCTGGCTCTCAGGGCATGACATGAAAGACAGGATGGCGAAGTACGCAAGAACCGCGAACATTTTTGCATTGATAAGAGACCAGGGATCAGGAGAAGTGAAGGCTGAAGGGAGAGTAACTTACAGGCTTGACAGAGCAGACAAAGAGAGCCTTAGAGTTGGACTAAGGATGGCCTTGAGGATTTTGGTTGCAGCAGGTGCTGTGGAAGTGGGAACATATAGAAGTGATGGCCAAAGAATCAAGTGCAAGGGAATCAAGGAGGAAGATTTAGACGAGTTTCTTGACACTGTGACAATAGTTGGGGGTCCAAGGTCCAGGAATGATGTGTGGACCATATTTACTACTGCGCATCAGATGACAAGTTGTAGAATGGGTGCCACTGAAGAAGAAGGTGCACTTGATGAGAATGGTGAGAGTTGGGAAGCAAAAGGCTTGTATGTGTGTGATGGGAGTGTTTTGCCCAGTGCAGTTGGTGTCAACCCCATGGTAACCATTGAGTCTACATCTTACTGTATTGCCACTAAGATTGCAGAATCACTTAGCAAAGAAAAGCAAAGCATTGATAGTTAA 2247 0.4473 MERRESCHPLLRGVRRREEKGYNHGLSTSQMHAMAAICDALFPSLPLNSLNKDTSQDHALSDFYNTSASQVPFPDEAAELLYKRVVPEAVSLVNWVLWILSFRLGTLLLCGRLCLDWKWPFIHKFSEISLEKREEILRNWTREKSWVALRVVFVLIKLVCFYNFFSRTDANGHNPTWKAIGYEVDTKEKLIQKERPLEKGLIETMYQTDSTLIQSLTEKGLEVTEDKRQNLYKVKCDVVIVGSGCGGGVAAAVLANSGHKVIVLEKGEYFVSHDYSSLEGPSMDELYESGGIMPSLDGKMMILAGSTVGGGSAINWSACIRTPDSVLREWSKKHKIPLFASSDYQSAMDTVCRRIGVTAKCKKESFQNQILIQGCEKMGLKVDSVAINSSADHYCGSCCYGCRTGDKKGTDTTWLVDAVGNGAVILTGCKAEKFILEDGKGGMKKKKCLGVIAAASWRSKVTKKLQIESKVTISACGSLNTPPLMISSGLKNPNIGRNLHLHPVQFAWGYFPEDMTNFSGNNYEGGIITSIHKEYAEDSTPRFIIETPSLGPGSFSAFVPWLSGHDMKDRMAKYARTANIFALIRDQGSGEVKAEGRVTYRLDRADKESLRVGLRMALRILVAAGAVEVGTYRSDGQRIKCKGIKEEDLDEFLDTVTIVGGPRSRNDVWTIFTTAHQMTSCRMGATEEEGALDENGESWEAKGLYVCDGSVLPSAVGVNPMVTIESTSYCIATKIAESLSKEKQSIDS 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02883 748 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 22 744 - -
Pumo5g02883 748 Gene3D - 221 528 IPR036188 -
Pumo5g02883 748 PIRSF Lg_Ch_AO 13 745 IPR012400 GO:0046577
Pumo5g02883 748 Pfam GMC oxidoreductase 237 504 IPR000172 GO:0016614|GO:0050660
Pumo5g02883 748 Gene3D - 651 739 IPR036188 -
Pumo5g02883 748 SUPERFAMILY FAD/NAD(P)-binding domain 235 741 IPR036188 -
Pumo5g02883 748 Pfam GMC oxidoreductase 597 725 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02883 Pumo-Chr5 76109623 76113568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02883 1 744 Acyl Lipid Metabolism Gene Families AT4G28570 57.560 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02883 K17756 - gmx:100808951 1362.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02883 5 76109623 76113568 Pumo5g02883 5 76109623 76113568 ECH