Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02874 ATGGCCAGAAACCTAGCAGGATTACTAGCACTACTTCTCGTTGTTTCGATCTGCGGAGCCGCCACGATTCCCGGCCCCGTCTCCGATGCTCACCGTTCCGCTGCCTTAGAGCTCTTCGATGGATCATTTTCAAGATTCTTGCGATTGGGAATTAAGCCTGATGTGAGCACAACCACTTGCAAGAAAGTAGTGGAAAACCTTGGGTCGTCGTCATCCCCTGTGAAGGATTTGTTCTATGCATTAAAGGTTAATGGCATATTAAAATGCAAGGTTAATGGGGATGTTTTCAAGGATATTGCTTCGAGACTTAAAGCCACTGTCAATGATGCGAGTACTTTGGTTGACATGTACTATTCAATAGGAAGTTTGGTTCTTATAAAGGACCAGGCTTCTGATGTTGGTGTGCTTCTTACTGATGCCGATGGGACCTTCCATTCAATCAAGGTGAATACAGTGAAAAATGATATATTGAAGCTTTTTGACAGCATTGAGAAATATGATGATGGAACCTTCTATTTTGATGAGAAATTTGTTGGTGGACGTGAGCATCAGGGTTCTCTTTCCACAACTTCTTCTGTTGTTCGAGGGGTTACAGCATTTGCTGCTGTAACTTCTGGAAAAATAAATCTTCCAGGGGATAAAATATTGGGTTTAGCAAAATTTTTCTTGGGCATTGGAATCCCAGGAGATGCCAAGGACTTCTTCAATCAAGTTGAATCATTAGCTCTTCTAGAGAACAACAGGGTTTCCATCCCATTGGTACTGTCACTTCCTGCAACGGTTTATTCATTATCCAAAAAAGATCAACTCAAGGTTAGGGTGAACACTGTACTTGGTTCAGCTGCACCACCTTTAACAGTTAAGCTTGTCCGAGCTTTCCGCTCTGATGTGAAAGATTCAGCTATTATTGAGAGCAAGGAGCTCCAATATGATCAAAATAATGGAATTCATGTCTTGGAAGTTTTCCCAGATAATGTGGATGTGGGAACTTATGTCTTTGTTTTTGAGATTGTACTTCACGATTCTACTGGTGAAAAAGTTTATGCTACTGGAGGCCAAATTCATGTACCAATATATGTCACTGGCATTATTAAAGTCAGCAATGCAGAAATTGCAGTTCTTGACAGTGATCTTGGAAGTGTTGAAACCCAGAAAACGCTAGATTTGGCTGGAAATGATGTTGTTTCACTCTCAGCTAACCACTTGCAAAAGTTGCGCTTTTCTTTCCAATTGACAACACCTCATGGTCTTGCTTTTAAGCCTCATCAGGCATTTTTCAAGTTGAAGCATGAGACAAAGCGTGAACACATCTTTGTGGTTGGAAATACTGGCAAGAAGTTTGAGATTATTCTTGATTTTCTTGGTTTGGTGGAGAAATTTTATTACCTCTCAGGCAGATATGACCTTGAGCTGACTGTCGGGGATGCTGTCATGATCTTCCAGAAGCACCTGAGAAGGCAGGCCCGTCTTCCTCCACTCCCTGTCGATCCTTACTCAAGATATGGGCCCAAAGCTGAGATAGCCCACTTATTCAGGGCTCCTGAAAAGCGACCACCCCAGGAACTCTCTCTTACTTTCTTGAGTTTGACCCTTCTGCCATTTATTGGCTTTTTGGTTGGGCTGTTACGCCTGGGAGTGAACTTGAAGAATTTTCCTTCTTCAGCAGTACCTGCTACATATGCCATCTTATTCCAGTTTGGGATTGCTGCAGTTCTATTGCTTTATGTACTTTTCTGGTTGAAGCTGGACTTGTTCACTACACTCAAAACTGTAGGATTTTTGGGAGCTTTTCTGATGTTTGTGGGACACAGAATTCTTTCCCATCTCGCTTCAACATCATCCAAGTTGAAGTCTGCATGA 1860 0.422 MARNLAGLLALLLVVSICGAATIPGPVSDAHRSAALELFDGSFSRFLRLGIKPDVSTTTCKKVVENLGSSSSPVKDLFYALKVNGILKCKVNGDVFKDIASRLKATVNDASTLVDMYYSIGSLVLIKDQASDVGVLLTDADGTFHSIKVNTVKNDILKLFDSIEKYDDGTFYFDEKFVGGREHQGSLSTTSSVVRGVTAFAAVTSGKINLPGDKILGLAKFFLGIGIPGDAKDFFNQVESLALLENNRVSIPLVLSLPATVYSLSKKDQLKVRVNTVLGSAAPPLTVKLVRAFRSDVKDSAIIESKELQYDQNNGIHVLEVFPDNVDVGTYVFVFEIVLHDSTGEKVYATGGQIHVPIYVTGIIKVSNAEIAVLDSDLGSVETQKTLDLAGNDVVSLSANHLQKLRFSFQLTTPHGLAFKPHQAFFKLKHETKREHIFVVGNTGKKFEIILDFLGLVEKFYYLSGRYDLELTVGDAVMIFQKHLRRQARLPPLPVDPYSRYGPKAEIAHLFRAPEKRPPQELSLTFLSLTLLPFIGFLVGLLRLGVNLKNFPSSAVPATYAILFQFGIAAVLLLYVLFWLKLDLFTTLKTVGFLGAFLMFVGHRILSHLASTSSKLKSA 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02874 619 PANTHER RIBOPHORIN II 10 618 IPR008814 GO:0006487|GO:0008250|GO:0016020
Pumo5g02874 619 Pfam Oligosaccharyltransferase subunit Ribophorin II 8 611 IPR008814 GO:0006487|GO:0008250|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02874 Pumo-Chr5 76028350 76036118 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02874 K12667 - gmx:100806815 1047.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02874 5 76028350 76036118 Pumo5g02874 5 76028350 76036118 ECH
Pumo5g02874 5 76028350 76036118 Pumo3g02466 3 37500742 37508035 PCT