Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02873 ATGGCAAGCATGGCAAGAGGAAGAGCAGATGTGAACTCCAGAAAAAAATTGGTCATAACTGTGTTGGTTTTGGTGATTGTTGGTGGTTTTTTCTACTTTTATTCTCAGAATAGTGATTCATCTTCTGTTGAGTATGGTGATAAACCTTTGAGACACTTTGGTTTGGGAGGGGACAAAGATGATGGTGAATCTTCCTCCATAGTTATTGGAGGAGTGGACAGTGCTGTACCAAAGAGCATTCCAGTCTGTGATGATCGTCTATCAGAGCTGATTCCTTGTCTGGACAGAAATCTCATATACCAAACAAGATTGAAGCTTGATTTATCTTTGATGGAGCACTATGAGAGACACTGTCCAACACCTGAGAGGAGATATAATTGTTTAGTTCCTCCTCCTCCAGGGTACAAGATTCCAATCAAGTGGCCCAAAAGCAGAGACCAGGTGTGGAAGGCAAATATACCTCATACCCATCTTGCAACTGAAAAATCTGATCAGAACTGGATGGTTGTGAAAGCTGAAAAAATAGTGTTTCCTGGTGGAGGAACCCACTTCCATTATGGTGCTGATAAATACATTGCTTCAATTGCTAATATGCTTAACTTTCCAAACAATAATATAAACAATGAGGGAAGACTCAGGTCTGTTCTTGATGTTGGCTGTGGGGTTGCTAGCTTTGGAGGATATCTTCTTTCTTCTAATGTGATAGCAATGTCATTGGCACCAAATGATGTTCATCAAAATCAAATCCAGTTTGCCTTAGAGAGGGGAATTCCAGCATATCTTGGTGTCTTGGGGACCCTAAGACTCCCATATCCGAGTAGATCATTTGAACTTGCTCATTGTTCTCGCTGTAGAATTGATTGGCTTCAGAGAGATGGTATTCTTCTCCTTGAGCTGGATAGGTTACTCAGGCCAGGAGGTTATTTTGCGTACTCGTCTCCTGAAGCCTATGCAGAGGATGAAGAGGATAGGAGAATATGGAGAGAAATGAGTGCTCTTGTGGAGAGGATGTGCTGGAAAATAGCTGCTAAGAAGGATCAGACTGTTATTTGGGTCAAGCCTCTCACAAATAGCTGCTACTTAAAGAGATTGCCTGGTACTAAGCCTCCACTCTGCAGATCTGATGATGATCCTGATGCTGTTTGGGGAGTTAAAATGAAAGCTTGCATTTCACGTTATACTGATCTAATGCACAAAGCAAAAGGAAGTGGTTTGGCTCCTTGGCCAGCTCGATTGACTACTCCACCTCCTCGTCTGGCAGAAATTCACTATTCTACTGAAATGTTTGAGAAGGACACGGAAGTTTGGCAACAACGAGTTCATAATTACTGGAGCAAGCTAAGAAGTAAGATTAAGCCAGACACAATTCGGAACGTGATGGATATGAAGGCAAATTTGGGTTCATTTGCAGCAGCTTTGAAGGACAAAGATGTTTGGGTTATGAATGTGGTGCCAGAAAATGAACCAAAAACTCTCAAGATAATATACGACAGAGGACTGATAGGAACGGTTCACAACTGGTGCGAAGCTTTTTCAACGTACCCTCGAACGTATGATCTACTCCATGCATGGACTGTATTTTCTGATATTATTAAGAAAGAATGCAGTCCAGAGGATTTATTAATTGAGATGGATAGAATCCTGAGGCCAAAGGGTTTCATCATTGTCCATGATAAGCGGTCAGTGGTGGAGTACATAAAGAAATACTTGCCAGCATTACACTGGGAAGCTGTGACCATATATGATGTACATCAAGGTAAAGATGATGATGATGATGCAGTGTTTATAATTCAAAAGAAGATGTGGCTCACAAGTGGTAGCATCCAGGTTTCAGAATAG 1839 0.4154 MASMARGRADVNSRKKLVITVLVLVIVGGFFYFYSQNSDSSSVEYGDKPLRHFGLGGDKDDGESSSIVIGGVDSAVPKSIPVCDDRLSELIPCLDRNLIYQTRLKLDLSLMEHYERHCPTPERRYNCLVPPPPGYKIPIKWPKSRDQVWKANIPHTHLATEKSDQNWMVVKAEKIVFPGGGTHFHYGADKYIASIANMLNFPNNNINNEGRLRSVLDVGCGVASFGGYLLSSNVIAMSLAPNDVHQNQIQFALERGIPAYLGVLGTLRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAEDEEDRRIWREMSALVERMCWKIAAKKDQTVIWVKPLTNSCYLKRLPGTKPPLCRSDDDPDAVWGVKMKACISRYTDLMHKAKGSGLAPWPARLTTPPPRLAEIHYSTEMFEKDTEVWQQRVHNYWSKLRSKIKPDTIRNVMDMKANLGSFAAALKDKDVWVMNVVPENEPKTLKIIYDRGLIGTVHNWCEAFSTYPRTYDLLHAWTVFSDIIKKECSPEDLLIEMDRILRPKGFIIVHDKRSVVEYIKKYLPALHWEAVTIYDVHQGKDDDDDAVFIIQKKMWLTSGSIQVSE 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02873 612 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 66 602 IPR004159 GO:0008168
Pumo5g02873 612 Gene3D Vaccinia Virus protein VP39 419 586 IPR029063 -
Pumo5g02873 612 Gene3D Vaccinia Virus protein VP39 207 350 IPR029063 -
Pumo5g02873 612 FunFam Probable methyltransferase PMT19 422 585 - -
Pumo5g02873 612 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 421 578 IPR029063 -
Pumo5g02873 612 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 89 599 IPR004159 GO:0008168
Pumo5g02873 612 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 350 IPR029063 -
Pumo5g02873 612 FunFam probable methyltransferase PMT3 187 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02873 Pumo-Chr5 76021016 76026242 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02873 - - gmx:100805403 1152.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02873 5 76021016 76026242 Pumo5g02873 5 76021016 76026242 ECH
Pumo5g02873 5 76021016 76026242 Pumo3g03629 3 76867416 76874063 PCT
Pumo3g02465 3 37495891 37500392 Pumo5g02873 5 76021016 76026242 PCT