Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02864 ATGGAGCGGTTGAAGTGGGCGCAGCTGGGGGAGAGGCTGAAGACGGGTGGGGCCCAGATGGGGCGAATGGTGAGCGGAAAAGTGAAGGAGATGCTGCAGGCCCCGACGCCCGAGTCCAAGATGGTGGACGAGGCCACACTGGAGACCATGGAGGAACCCAATTGGGGCATGAATCTCAGAATCTGCGGCCTCATCAACAGCGACCAGTTCAACGGCTCCGAGGTCGTTAAGGCCATCAAGAGAAAGATCAACCACAAGAGCCCCGTCGTCCAGACCCTCAGCCTCGACCTCCTCGAAGCCTGTGCCATGAACTGCGACAAGGTCTTCTCCGAAATCGCTTCCGAGAAGGTTCTCGATGACATGGTTCGCTTGTTTGAAAACCCCCAGGCCCAACACCACTCTCGCAGACGGGCTTTTCAGTTGATTCGGGCCTGGGGCGAGTCCCAGGATCTTGCCTATCTCCCCGTCTTTCGTCAAACTTATATGAGTTTGAAAGGAAGGGATGAACCACTTGACATGGCGGGAGGAAATTCACCACCTGTTCCGTATGCCTCAGAGTCATATACACATCAGTATCCTGTGGATGCCCCTGAAAGATACCCAATTCCTCATGCTGAACTACATGATATGGATGATCCAGCTGCTTTCTCTTCCAATTACCAACACATCTCAGTTGAGGAGAAGAAAGAGCATCTTGTGGTTGCTCGGAACAGTCTCGAATTGCTCTCTAGCATTTTGAGTTCCGAGGCAGAGCCTAAACCTTTGAAGGAAGATTTGACTGTGAGCTTGTTGGACAAGTGCAAGCAATCACTCTCTATCATCAAGGGGATTGTGGAAAGCACTACAAACGATGAAGCAACACTTTTTGAGGCTTTATATCTCAACGATGAGCTGCAGCAGGTAGTTTCTAAGTATGAGGAGTTAGAAGCTGCTCAAAGTTCTGGGGCACAACAACCTCAAAATGCTGACACTGCTAAGCATGATGCCGAAGCTGTTCAAAATCCCAATGAAGTACCCGAAAATGATGAATCTGAAGCTGCTCAGAATCTGGATCGAAAGCTTCCTCAAAAGTCTAACACTCTTGAAGTCAATGCAACTGAGGGCAAGGGGGATGGTCTTACTGAAACTAAAATAGTGGATGGCACGAAGGAGAAGAATTCTGAATCTAGTTTCAAGCGAGATACCGAATGA 1191 0.4962 MERLKWAQLGERLKTGGAQMGRMVSGKVKEMLQAPTPESKMVDEATLETMEEPNWGMNLRICGLINSDQFNGSEVVKAIKRKINHKSPVVQTLSLDLLEACAMNCDKVFSEIASEKVLDDMVRLFENPQAQHHSRRRAFQLIRAWGESQDLAYLPVFRQTYMSLKGRDEPLDMAGGNSPPVPYASESYTHQYPVDAPERYPIPHAELHDMDDPAAFSSNYQHISVEEKKEHLVVARNSLELLSSILSSEAEPKPLKEDLTVSLLDKCKQSLSIIKGIVESTTNDEATLFEALYLNDELQQVVSKYEELEAAQSSGAQQPQNADTAKHDAEAVQNPNEVPENDESEAAQNLDRKLPQKSNTLEVNATEGKGDGLTETKIVDGTKEKNSESSFKRDTE 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02864 396 MobiDBLite consensus disorder prediction 351 365 - -
Pumo5g02864 396 MobiDBLite consensus disorder prediction 309 324 - -
Pumo5g02864 396 ProSiteProfiles VHS domain profile. 45 172 IPR002014 GO:0035091|GO:0043130
Pumo5g02864 396 Gene3D - 225 323 IPR038425 -
Pumo5g02864 396 Pfam GAT domain 236 309 IPR004152 GO:0035091|GO:0043130
Pumo5g02864 396 CDD VHS 39 165 - -
Pumo5g02864 396 SUPERFAMILY GAT-like domain 189 309 - -
Pumo5g02864 396 SMART VHS_2 38 168 IPR002014 GO:0035091|GO:0043130
Pumo5g02864 396 SUPERFAMILY ENTH/VHS domain 34 167 IPR008942 -
Pumo5g02864 396 PANTHER TOM1-LIKE PROTEIN 1 5 372 IPR044836 GO:0035091|GO:0043130|GO:0043328
Pumo5g02864 396 Pfam VHS domain 39 148 IPR002014 GO:0035091|GO:0043130
Pumo5g02864 396 Gene3D - 28 182 IPR008942 -
Pumo5g02864 396 MobiDBLite consensus disorder prediction 309 396 - -
Pumo5g02864 396 ProSiteProfiles GAT domain profile. 223 310 IPR004152 GO:0035091|GO:0043130
Pumo5g02864 396 MobiDBLite consensus disorder prediction 373 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02864 Pumo-Chr5 75868844 75871539 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02864 - - gmx:100803803 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02864 5 75868844 75871539 Pumo5g02864 5 75868844 75871539 ECH