Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02856 ATGGATATGGAGAAGAAAGAAGGTGAAGCCCCCGTGTTCTGGTTAGAAACCTCTGACTCTGTTTGCCGCCGCCACCACTTTGAACCCGATGGTCAACTCTCCGTAGTGATTGTTGATGATTCCAGGCCCCTTTACCAAAGGGTGGCTGGATCTTTCATGAATAAATTTTTCCCCTCGGGATATCCATACAGTGTGAATGAAGGCTATCTTAGATACACGCAGTTTCGAGCTGTGCAACATGTTACCAGTGCAGCGCTATCGGTGCTATCAACTCAGTCCTTGCTATTTGCTGCAGGGTTGCGGCCCACTCCTGCACAAGCAACTGCTGTTAGTTGGATTTTAAAGGATGGAATGCAACATGTAGGGAAGCTAATATGTAGCAATTGGGGTGCTAGAATGGATTCTGAGCCTAAACGTTGGAGACTACTAGCTGATGTGCTCTACGATATAGGCATTGGCTTGGAAGTGCTTTCTCCATTATGCCCGCATCTTTTTCTTGAAATGGCAGGCTTAGGAAATTTTGCAAAGGGGATGGCAGTTGTTGCAGCAAGAGCAACAAGGTTGCCTATATATTCTTCATTTGCTAAAGAAGGAAATCTCAGTGACCTATTTGCTAAAGGAGAGGCTTTTTCAACTCTCTTTAATGTTATTGGAATTGGAGTTGGAATTCAATTAGCATCTACCATCTGTGCATCAATGCAGGGAAAGTTGGTTGTGGGTCCTCTCCTTTCAATTATACATTTATACAGTGTGTCTGAAGAAATGAGAGCAACTCCCATCAATACCTTGAATCCACGAAGAACTGCAATGGTTGTGGCTGATTTTCTTAAGGCAGGAATTGTATCAAGCCCTGCTGATCTAAGATATAGAGAAAATCTGCTGTTCAATCTGCAACTCAAAGAAGATGCTGGAAATGTAAGAGTGGGAAAGGCTGTGCACAAGGCCATTAAGCCTTCCAGGCTTCTTGAATTAAAACAAGTGTTCCCTGAGGAGAAGTTTCTTTTAAACTATGGGAATAAATGCATTGACATGGTATTGGAGCAAGATGCTAGTGGTGAAGATGCATTGAGAGGGTGGCTAGTTGCTGCATATGCTGCAGAAACTGAGAGTTCCTCTCATGAGCTCAATGCTAGTGTCCTGCATGAGGCTTATGAGAAAATGAATGGTGTCTTTTCTGTATTCTTAAGGGAATTACAGAACAAAGGGTGGCACACTGATCGGTTTTTGGATGGAACTGGGAGCCGTTTTGCATTCTAG 1257 0.4352 MDMEKKEGEAPVFWLETSDSVCRRHHFEPDGQLSVVIVDDSRPLYQRVAGSFMNKFFPSGYPYSVNEGYLRYTQFRAVQHVTSAALSVLSTQSLLFAAGLRPTPAQATAVSWILKDGMQHVGKLICSNWGARMDSEPKRWRLLADVLYDIGIGLEVLSPLCPHLFLEMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAFSTLFNVIGIGVGIQLASTICASMQGKLVVGPLLSIIHLYSVSEEMRATPINTLNPRRTAMVVADFLKAGIVSSPADLRYRENLLFNLQLKEDAGNVRVGKAVHKAIKPSRLLELKQVFPEEKFLLNYGNKCIDMVLEQDASGEDALRGWLVAAYAAETESSSHELNASVLHEAYEKMNGVFSVFLRELQNKGWHTDRFLDGTGSRFAF 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02856 418 Pfam Vitamin B6 photo-protection and homoeostasis 47 278 IPR006968 -
Pumo5g02856 418 PANTHER RUS1 FAMILY PROTEIN C16ORF58 14 417 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02856 Pumo-Chr5 75804508 75808332 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02856 - - gmx:100820508 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02856 5 75804508 75808332 Pumo5g02856 5 75804508 75808332 ECH
Pumo5g02856 5 75804508 75808332 Pumo3g02453 3 37311305 37314572 PCT