Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02800 ATGGATGCAAATTGTTTTAGGCTGAACAAGAGTTCAGCACTATGTTCAACTCACTGGAACCCCATCAAACGTAAGCCAGAACATCCTTGTGTGGTTGCAATGCTCAGAACACCCTCAGAAAACATTACAGGAGAAGCAAGAAACACTAATGCTTACAAAGATAACTTGTTCGATCGTTTAGCAATACAGCATCTATCAAAAAGCGTTCAAGAAGCCACAGGACTCAGTAACAATAAGAGTGGGTATGAGAGCTTGGTTGAGGCAGCTACTGTGGCTAAACAGAAATTTGACCCTATTCAGCAGCAAGAAGTTATCATCCAAGCTCTTCACAGAGCATTCCCAAAGCCAATACTTTCATTGATAAAGACACTGCTACCACCATCTAAACTCTCAAGGGAATATTTTGCCGTTTTCACCACTTTGTTCTTTGCTTGGTTAGTCGGGCCTTCCGAGGTGAGAGAATCCGAGGTCAACGGGAGAAGGGAAAAAAATGTAGTCTACATCACAAAATGCAGGTTTTTAGAGGAGACAAATTGTGTAGGGATGTGTATTAATCTCTGCAAAATGCCATCTCAATCGTTTATGAAGGACACTCTGGGGATGCCAGTCAACATGGTCCCCAATTTTGATGACATGAGTTGTGAGATGATATTTGGACAGGACCCTCCAGCATATACTGATGATCCAGCACTGAAGCAACCATGCTATAAACTATGTAATTATTTCTTTGCAAGATTGATCACATTCATTTATGACCATGTTATTATGGAGCCTAGCTAG 780 0.4128 MDANCFRLNKSSALCSTHWNPIKRKPEHPCVVAMLRTPSENITGEARNTNAYKDNLFDRLAIQHLSKSVQEATGLSNNKSGYESLVEAATVAKQKFDPIQQQEVIIQALHRAFPKPILSLIKTLLPPSKLSREYFAVFTTLFFAWLVGPSEVRESEVNGRREKNVVYITKCRFLEETNCVGMCINLCKMPSQSFMKDTLGMPVNMVPNFDDMSCEMIFGQDPPAYTDDPALKQPCYKLCNYFFARLITFIYDHVIMEPS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02800 259 Pfam Beta-carotene isomerase D27-like, C-terminal 145 225 IPR025114 GO:0005506
Pumo5g02800 259 PANTHER BETA-CAROTENE ISOMERASE D27 25 240 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02800 Pumo-Chr5 75031556 75042362 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02800 K17911 - gmx:100813404 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02800 5 75031556 75042362 Pumo3g02392 3 36322443 36324060 PCT