Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02781 ATGGCTTTTCAAATAAGGGTGATACTAGCAACCCTTATAGTGGCTTCAGTAAAATTGGTTAATGGTCAAGTTAGTACGTCCTGCACAACCTCTATGATGAGCAGTTTCACACCATGTGCCAACATCATTACAGGAAGCACTAATAATGGTTTAGTGCCACCAAGTACGTGTTGTGATTTATTAAGGTCTTTGATGAGCACTAACATGGATTGTGCTTGCATGGTTATCTCTGCCAATGCTCCATCTTTCCAACAACCCATTAGCCAAGCTCTTGCCCTCTCCCTCTCACAAGCATGCAACATTAATGGAGTTCCTCTACAGTGCAAAGGCCCTGCAGTTCTTGGACCGAACAGCTCAACTCTCCCTTCAATTGCTACATCACCCTTAAACCCACAAGATTCAAAAATGGTGGCTATGGGAGAAGAACAGAAATATGAGAAAGTGCAATTGGCACGGGAACTGGCACCAGCACCAACAGCAGAAGCACCCACTAGAACTACAATTCCACAAATCCGACCAGTGTTGACTCCACGTCCTTCGCCATCTCACTCATCTTTTGTCTCCCCCTGGTCCTCACCTTTTGCATTCTTCATAGGAATCATGGTTTTTGGCCTCTATCAGTAG 624 0.4487 MAFQIRVILATLIVASVKLVNGQVSTSCTTSMMSSFTPCANIITGSTNNGLVPPSTCCDLLRSLMSTNMDCACMVISANAPSFQQPISQALALSLSQACNINGVPLQCKGPAVLGPNSSTLPSIATSPLNPQDSKMVAMGEEQKYEKVQLARELAPAPTAEAPTRTTIPQIRPVLTPRPSPSHSSFVSPWSSPFAFFIGIMVFGLYQ 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02781 207 SMART aai_6 28 108 IPR016140 -
Pumo5g02781 207 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 10 155 IPR043325 -
Pumo5g02781 207 CDD AAI_LTSS 36 101 - -
Pumo5g02781 207 Gene3D - 25 108 IPR036312 -
Pumo5g02781 207 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 108 IPR036312 -
Pumo5g02781 207 Pfam Probable lipid transfer 13 108 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02781 Pumo-Chr5 74716820 74719381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02781 23 109 Lipid Metabolism Gene Families AT2G48140 49.425 6.78e-25 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02781 - - gmx:100786841 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02781 5 74716820 74719381 Pumo5g02781 5 74716820 74719381 ECH