Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02779 ATGTCTGGACTGATTGAAGGACTTCCTGATGCTGTTGCAATTAGGTGCCTTGCACGGGTTCCCTTCTACCTCCACCCAAAGTTAGAGCTTGTCTCTCGTTCTTGGCAAGCAGCCATTTGTAGCCCTGAACTATTTAAAGCTCGGCAGGAGGTTGGTTCGACTGAGGATCTGTTATGTGTCTGTGCTTTTGATCCAGAGAACTTGTGGCAGCTGTATGACCCTATGCGAGATCTCTGGATTACACTTCCTGTTCTTCCCTCAAAGATCAGGCACCTTTCCAACTTTGGTGCTGTTTCTACTGCTGGAAAGTTGTTTGTGATTGGTGGTGGAAGTGACGCTGTCGATCCTTTGACTGGTGACCAAGATGGTTGTTTTGCAACAGATGAAGTCTGGTCATATGACCCTGTTGTCCGGCAGTGGGCCCCTCGTGCATCAATGCTTGTTCCCCGTTCTATGTTTGCATGCTGTGTTTTGAATGGGAAAATTGTTGTGGCTGGGGGCTTCACTAGCTGCAGAAAATCAATATCTCAAGCAGAAATGTATGATCCTGACAAGGATGTTTGGATTCCAATGCCTGATCTTCATCGCACTCATAATTCGGCCTGTTCAGGAGTAGTGATTGGTGGAAAGGTGCATGTACTGCACAAGGATATGTCAACAGTGCAAGTTCTAGACAATGCAGGGCCCGGGTGGACAGTTGAGGAATGTGCATGGCTCCAAGGTCCAATGGCAGTTGTCGGTGACGCACTTTACGTGATGAGCCATGGATTAATCTTCAAGCAGGGCAAAGAAGGGAGAAAGGTTGTAGGTTCAGCATCTGAGTTTCGAAAGAGAATTGGGTTTGCAATGACTGGACTAGGTGATGAGTTATACGTGATTGGAGGCTTCATTGGACCAGATAGATGGAATTGGGACATTAAGCCATTATCCGAAGTTGATGTTCTCACACTTGGAAGTGAGAGACCAACTTGGCGCCAAGCAGCTCCAATGACACGGTGTCATGGTACTATTCTTGGTTGTACGCTGCTCAGAATTTAG 1038 0.4711 MSGLIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAICSPELFKARQEVGSTEDLLCVCAFDPENLWQLYDPMRDLWITLPVLPSKIRHLSNFGAVSTAGKLFVIGGGSDAVDPLTGDQDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSCRKSISQAEMYDPDKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNAGPGWTVEECAWLQGPMAVVGDALYVMSHGLIFKQGKEGRKVVGSASEFRKRIGFAMTGLGDELYVIGGFIGPDRWNWDIKPLSEVDVLTLGSERPTWRQAAPMTRCHGTILGCTLLRI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02779 345 SMART kelc_smart 289 344 IPR006652 GO:0005515
Pumo5g02779 345 SMART kelc_smart 161 208 IPR006652 GO:0005515
Pumo5g02779 345 SMART kelc_smart 103 160 IPR006652 GO:0005515
Pumo5g02779 345 Gene3D - 61 342 IPR015915 GO:0005515
Pumo5g02779 345 PANTHER OS02G0202900 PROTEIN 3 263 IPR045887 -
Pumo5g02779 345 CDD F-box_AtAFR-like 4 48 - -
Pumo5g02779 345 Pfam Kelch motif 149 194 IPR006652 GO:0005515
Pumo5g02779 345 Pfam Kelch motif 92 146 IPR006652 GO:0005515
Pumo5g02779 345 Pfam Kelch motif 278 330 IPR006652 GO:0005515
Pumo5g02779 345 SUPERFAMILY Kelch motif 61 332 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02779 Pumo-Chr5 74704088 74708224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02779 8 188 Miscellaneous Gene Families AT4G33900 30.000 3.88e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02779 - - gmx:100788983 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02779 5 74704088 74708224 Pumo5g02779 5 74704088 74708224 ECH