Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02766 ATGGCTTCTCACTTCTCCACTCACTGCCACCTTCCCTCTTTCTCTTCTTCTAACCATTTCTCTTTTACATCTTCTTCTGTCTCTCTTCACTTCTTCTCCAAATCCTCTCTGGATGCCGTGTCGTCCGAGACTAACGACAAACAAGAGATAAGATGCAGAGCAATATCCAAACCACGAACACAAGAATATTCAGACATATTTCAGGGTAGTCTAGCGACGTTAAAGTTTCGTGAGATTAATGTGGAAGATGACATAGAAGAGGAGCAAGACATTGGGGTTTTGGTGGCAAATGAGATCAAGAAGCGAGTGGACACTATCAAATCAATATTGGGTTCCATGGAAGATGGAGAGATAACAGTATCTGCTTATGACACTGCTTGGGTTGCTCTGATAGAAGATGTTCATGGAAGTGGTGCCCCTCAATTTCCATCGAGTCTAGAATGGATAGCAAAAAATCAACAACCTGATGGATCATGGGGTGATAAGGAATTATTTTCGGCCCATGATCGGATTATTAACACGTTGGCTTGTGTTATTGCATTAAAATCATGGAATATGCACCCTGAAAAGTGTGAGAAAGGAATGGCATTTTTTAAAGAGAATCTTAACAAGCTTCAGAATGAGAATGTGGAGCATATGCCAATTGGGTTTGAAGTAGCTTTTCCATCACTTCTTGACATGGCTCGTGGTTTGAACATTGAAGTGCCGGATAATTCCCCTATCCTGAACAAAATCTTTGCAATGAGAAACGTAAAACTCACAAGAATACCAAGAGAGATGATGCATAAAGTGCCCACAAGTCTGCTTCATAGCTTGGAAGGGATGTCAGGCCTTGACTGGAAAGAACTTCTAAAACTGCAGTCTCAAGACGGGTCCTTCTTGTTTTCTCCGTCCTCCACCGCCTTTGCTCTCATGCAAACTAAAGATCAAAATTGTCACAATTACTTGAATAAAATCGTCAAGAGGTTCAATGGGGGAGTTCCAAACGTGTATCCAGTGGATTTGTTCGAACATATTTGGGTGGTTGATAGGCTTGAACGCCTCGGAATATCTCGGTATTTTCAGCAAGAGATAAAAGACTGTTTGGGTTATGTTTACAGATATTGGACTGAAAAGGGTATTTGTTGGGCAAGAAATTCAAATGTTCAAGACATTGATGACACAGCAATGGGTTTCAGACTACTAAGATTACACGGCCACCAAGTTTCAGCCGATGTGTTCAAGAACTTTGAGAGAAATGGTGAATTCTTCTGCTTTACGGGGCAGACCACGCAAGCGGTGACAGGAATGTTTAATCTGTATAGGGCCACACAAGTAATGTTCCCCGGAGAGAAAATTCTTGAACATGGGAAGCACTTCTCTGCCAAATTTTTGAGGGAGAAGAGAGCAGCAAATGAGCTAGTAGATAAATGGATCATAATGAAGAACTTGGCAGAAGAGGTTGCGTATGCTTTGGACGTACCATGGTACGCAAGTTTACCACGTGTGGAGACAAGATTCTACATTGATCAATACGGTGGTGAGAGTGACGTGTGGATAGGGAAAACCCTTTATAGGATGGCCTATGTGAACAACAATAACTATCTCGAGCTTGCTAAATTAGATTACAACAATTGCCAGGCACTACATCTAATAGAGTGGGGGAGAATTCAGAAGTGGTACTCAGAATCTAGATTGGGAGAGTTTGGAATGAACAGAAGAACCCTTCTGTTGGCATATTTTTTGGCAGCAGCAAGCATATATGAGCCTGAAAAGTCTCATGTGAGACTAGCGTGGGCCAAAACCACAGTCTTACTTGAGACCATAACGTCCTATGTTAGTGTTGCAGAAATGAGGAAAGCTTTCATGAAAAAATTCAGTGACTGCATTAACAGGCGAGACTACTCCATTGGCTGGAGGTTGAACAGAAACAGCACAGGACATGGACTCGCTGAGACTTTGGTTGCCACCATAGATCAAATCTCGTGGGATACACTTGTGTCTCAAGGTCATGAAATTGGATATGATATGCACCGCAGTTGGGAAAAGTGGCTTTCAAGTTGGCATGGCGAAGGAGACAAATGTGAAGGACAAGCAGAGCTTTTGGCACACATAATAAACCTATGTGGCGGGCATTGGATTTCCGAGGATCAAGTGTTCGATCCGCAATATCAGAGTCTCCTTCAACTCACTAACACACTATGCCATAGACTCCGTTGTTATCAAAAGGACAAGGAACTTGAGAGCGGCAGCTTCATCACCCCGGAAGCAGAGTCAAAAATGCAAGAACTCGTGCAATTGGTGTACCAAAAATCTACAACTGGCATTGATTTCAATATCAAGAATACTTTTCTCGCAGTGGCCAAGAGTTTTTACTATACAGCTTTCTGTGATTCAAGGACCATCAACTTCCATATTGCCAAAGTTCTGTTTGATAAAGTCGTTTAA 2427 0.4219 MASHFSTHCHLPSFSSSNHFSFTSSSVSLHFFSKSSLDAVSSETNDKQEIRCRAISKPRTQEYSDIFQGSLATLKFREINVEDDIEEEQDIGVLVANEIKKRVDTIKSILGSMEDGEITVSAYDTAWVALIEDVHGSGAPQFPSSLEWIAKNQQPDGSWGDKELFSAHDRIINTLACVIALKSWNMHPEKCEKGMAFFKENLNKLQNENVEHMPIGFEVAFPSLLDMARGLNIEVPDNSPILNKIFAMRNVKLTRIPREMMHKVPTSLLHSLEGMSGLDWKELLKLQSQDGSFLFSPSSTAFALMQTKDQNCHNYLNKIVKRFNGGVPNVYPVDLFEHIWVVDRLERLGISRYFQQEIKDCLGYVYRYWTEKGICWARNSNVQDIDDTAMGFRLLRLHGHQVSADVFKNFERNGEFFCFTGQTTQAVTGMFNLYRATQVMFPGEKILEHGKHFSAKFLREKRAANELVDKWIIMKNLAEEVAYALDVPWYASLPRVETRFYIDQYGGESDVWIGKTLYRMAYVNNNNYLELAKLDYNNCQALHLIEWGRIQKWYSESRLGEFGMNRRTLLLAYFLAAASIYEPEKSHVRLAWAKTTVLLETITSYVSVAEMRKAFMKKFSDCINRRDYSIGWRLNRNSTGHGLAETLVATIDQISWDTLVSQGHEIGYDMHRSWEKWLSSWHGEGDKCEGQAELLAHIINLCGGHWISEDQVFDPQYQSLLQLTNTLCHRLRCYQKDKELESGSFITPEAESKMQELVQLVYQKSTTGIDFNIKNTFLAVAKSFYYTAFCDSRTINFHIAKVLFDKVV 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02766 808 SFLD Terpene Cyclase Like 1 N-term 96 519 - -
Pumo5g02766 808 FunFam Ent-copalyl diphosphate synthase, chloroplastic 312 536 - -
Pumo5g02766 808 Gene3D - 105 537 IPR036965 GO:0010333|GO:0016829
Pumo5g02766 808 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 96 519 - -
Pumo5g02766 808 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 290 510 IPR008930 -
Pumo5g02766 808 FunFam Ent-copalyl diphosphate synthase 122 334 - -
Pumo5g02766 808 Pfam Terpene synthase family, metal binding domain 529 686 IPR005630 GO:0000287|GO:0010333|GO:0016829
Pumo5g02766 808 Pfam Terpene synthase, N-terminal domain 279 485 IPR001906 GO:0010333|GO:0016829
Pumo5g02766 808 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 122 305 IPR008930 -
Pumo5g02766 808 FunFam Ent-copalyl diphosphate synthase, chloroplastic 539 808 - -
Pumo5g02766 808 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 97 805 - -
Pumo5g02766 808 Gene3D Farnesyl Diphosphate Synthase 539 808 IPR008949 -
Pumo5g02766 808 Gene3D - 122 334 - -
Pumo5g02766 808 SUPERFAMILY Terpenoid synthases 524 789 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02766 Pumo-Chr5 74508824 74519627 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02766 K04120 - gmx:100784193 1530.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02766 5 74508824 74519627 Pumo5g02766 5 74508824 74519627 ECH