Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02763 ATGGCTTCTCAGTTGTCCTTCATTCTCAGTCATAGGCTTCCTCCTTCATGTGCGAGACCTGCAGCAAAATCCTGTGACACTGTCAATTTTTCCATTCCATCACCTTATAATATTTTCGGAGGTCTTCGTCCCCTCGGATTCGCAGAAAGCAAACATCTCAAGATTTGTGGATTTCAGCCAATATGCTCTCGGTCTCAAGCATGTGTTGCTGAAGTGTGTCAGGATAATAATATCTTGAAGGATGATAATATAGACGAGGAAGCTCTTAACCAGGTTTTGGTAACAAACCAGATACGAAAAAAAATAAATGTCATAAAATTGATGTTGTATTCCAAAGAAGATGGAGAAATAACAATATCAGCTTATGACACGGCATGGGTTGCCCTAGTGAAAAATGTTCAGGGTGGAAATTCACCTCAATTCCCCTCCTGTCTTGAATGGATTGCAAATAATCAGCTACCTGATGGCTCCTGGGGAGACTCTGAATTATTCGTAGCCCATGATCGCATTCTTAACACATTAGCTTGTGTTATTGCATTAAGATCATGGAACATGCACCCTGAGAAGTGCGAGAAAGGAATGACATTTTTTAAGGAGAATTTGTACAAGCTTCAGGATGAAAATGCGGAACATATGCCTATCGGGTTTGAAGTTGCTTTCCCCTCTCTTCTTGATCTAGCAAGAAGTTTGAATATTGAAGTGCCAGATGACTCTCCTATCCTCAAAAACATCTTTGCAATGAGAGACCTCAAGCTTAAGAAAATACCGAGAGAGGTTCTGCACAAGGTCCCTACAACACTTCTCCATAGTTTGGAGGGAATGCCAAACTTAGACTGGAAGCAGCTTCTAAAGTTGCAGTCCCAAGATGGGTCATTCTTGTTCTCTCCATCCTCTACAGCTTATGCTCTCATGCAGACTAAGGATGGAAATGCTCACAAATACTTGGAAAAAACAGTCCAGAGGTTCAATGGGGGAGTTCCAAATGTCTATCCGGTGGATTTGTTTAAACGAATATGGGTTTTCGATAGACTTGATCGTCTTGGAATTTCAAGATATTTTCAGTCAGAAATCAAAGATTGTGCGACTTATGTCTCAAGATACTGGACTGAGAAGGGTATTTGCTGGGCAAGGAATTCAGAGGTTCAAGATATAGATGACACAGCAATGGGATTTAGACTACTAAGGTTGCATGGGCACCAAGTTTCACCCAGTGTGTTTGAGCACTTTAAGAAAAATGGCGAATTCTTCTGCTTTTCTGGGCAGTCAAACCAAGCTGTGACAGGAATGTTTAATCTTTATAGAGCATCTCAAGTGCTATTTCAAGGAGAGAAGATTCTTGAGGATGCCAAGAACTTCTCAGCCAAATTTTTAACTGAGAAACGTGCAGCAAATGAGCTCCTAGATAAATGGATCATAACCAAAGATTTACCTGGCGAGGTGGGTTACGCGCTGGACGTGCCCTGGTATGCCAGCTTACCGAGACTGGAGACAAGATATTACCTTGAACAATATGGTGGTAGCAGTGATGTTTGGATTGGCAAGACCCTTTACAGGATGCCCTACGTGAACAATGATGTTTATCTCGAGCTTGCAAAATTGGATTACAGCAATTGTCAAGCAGTGCATTGTGCGGAATGGGAAAAAATCCAATGGTGGTACTCGGAAGCAGGACTAGAAGGGTTTGGGTTGAGCAAACAAAGTCTCCTATTCTCTTACTTTATAGCAGCAGCCAGCATATTTGAACCTGAGAGGTCTCGAGAGCGACTTGCATGGGCTAAAACTGCTGCATTGCTCGACACACTGAGGTCCTACATTAAGGATGAAGAAACTAAGAGTGCTTTTCTAGATATGTTCAACAACAGCATTAACGGAGGAGACTACTCAAACAAGCAGTTGAACAAGAACAAGAGAGAAGAGGAAATCCTGGAGATTTTGCTGACAAACCTTGATTACCTTGGGTTCGAAATGTTTCGAAGTTGGCTGTCAAGTTGGCAAAATGAAGGGAACAGTTTTGGAAGAGAAGCTGAGCTGATTGTGCAAATCATAAATGTAATGGCTGGCTATTGGTCAGGAGAACTACATCTCAATCCACAGTACCAGAGGTTGCTCGAAGTCACTAACAGAGTCTGTCATGGGCTCCGTAATTGTCAAAGCAGCAAGGCACATGATAGTGGCAGCGACAACCTGAGTACAACCATCATCACTACTCCTCAAATAGAATCAGACATGCAAGAACTTGTGCAATTGGTGCTCCAAAATTCCTCAGATGGCGTGCACACCAATGTGAAGAATTCATTCCTCACAGTGGCCAAGGGCTTTTACTATGGCGCATATTGTGACCCAGAGACCATAAACTCTCATATTGATAAAGTACTCTTTCAAAAAGTGATGTAA 2394 0.4219 MASQLSFILSHRLPPSCARPAAKSCDTVNFSIPSPYNIFGGLRPLGFAESKHLKICGFQPICSRSQACVAEVCQDNNILKDDNIDEEALNQVLVTNQIRKKINVIKLMLYSKEDGEITISAYDTAWVALVKNVQGGNSPQFPSCLEWIANNQLPDGSWGDSELFVAHDRILNTLACVIALRSWNMHPEKCEKGMTFFKENLYKLQDENAEHMPIGFEVAFPSLLDLARSLNIEVPDDSPILKNIFAMRDLKLKKIPREVLHKVPTTLLHSLEGMPNLDWKQLLKLQSQDGSFLFSPSSTAYALMQTKDGNAHKYLEKTVQRFNGGVPNVYPVDLFKRIWVFDRLDRLGISRYFQSEIKDCATYVSRYWTEKGICWARNSEVQDIDDTAMGFRLLRLHGHQVSPSVFEHFKKNGEFFCFSGQSNQAVTGMFNLYRASQVLFQGEKILEDAKNFSAKFLTEKRAANELLDKWIITKDLPGEVGYALDVPWYASLPRLETRYYLEQYGGSSDVWIGKTLYRMPYVNNDVYLELAKLDYSNCQAVHCAEWEKIQWWYSEAGLEGFGLSKQSLLFSYFIAAASIFEPERSRERLAWAKTAALLDTLRSYIKDEETKSAFLDMFNNSINGGDYSNKQLNKNKREEEILEILLTNLDYLGFEMFRSWLSSWQNEGNSFGREAELIVQIINVMAGYWSGELHLNPQYQRLLEVTNRVCHGLRNCQSSKAHDSGSDNLSTTIITTPQIESDMQELVQLVLQNSSDGVHTNVKNSFLTVAKGFYYGAYCDPETINSHIDKVLFQKVM 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02763 797 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 93 518 - -
Pumo5g02763 797 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 289 508 IPR008930 -
Pumo5g02763 797 Pfam Terpene synthase, N-terminal domain 278 484 IPR001906 GO:0010333|GO:0016829
Pumo5g02763 797 Gene3D Farnesyl Diphosphate Synthase 538 797 IPR008949 -
Pumo5g02763 797 SFLD Terpene Cyclase Like 1 N-term 93 518 - -
Pumo5g02763 797 Gene3D - 105 535 IPR036965 GO:0010333|GO:0016829
Pumo5g02763 797 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 96 795 - -
Pumo5g02763 797 Gene3D - 121 333 - -
Pumo5g02763 797 SUPERFAMILY Terpenoid synthases 523 720 IPR008949 -
Pumo5g02763 797 FunFam Ent-copalyl diphosphate synthase 121 333 - -
Pumo5g02763 797 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 97 403 IPR008930 -
Pumo5g02763 797 FunFam Ent-copalyl diphosphate synthase, chloroplastic 311 535 - -
Pumo5g02763 797 Pfam Terpene synthase family, metal binding domain 528 628 IPR005630 GO:0000287|GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02763 Pumo-Chr5 74440817 74449057 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02763 K04120 - gmx:100807519 1289.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02763 5 74440817 74449057 Pumo5g02763 5 74440817 74449057 ECH