Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02749 ATGGAAGCAACGCGATTCTCCCCTAATCACTTCCATCCACACTGCTTCCAAACCAAACCCAACACACTTAGAGAAAGAAGATACGTAAAGTGCATCAACGGAATTGGAACTAGGGTTTCCCTTTTCACAATCCCCGCATTCAACGCACCGAACCGGACTCTCTCTGTTAACTTCTCCGACCGGCTCCGAGGTGACTATCTGCGCGTCGATGCTCCAACGAACGAACTTTCGAACGAGGAAGTTGTTCCGGCGGTTGTTGCATCGTCGCAGGGTGCTGACAACTCGGGAACCCTGCAATTGAAGCCTGTAATGTTCAGAAACAGGTTTCTGAACTTTGTGCGATTGGGTTCTGTGATTAACGGTGCTGCTGAATCGTTTTTCAAGAGCGAGATTCGGAGGAGGCTGTTCGTGACGGCTGTGTTAATTGTACTTAGTCGCGTTGGTTATTTTATTCCTCTTCCGGGGTTTGACAGAAGGTTGATACCGGAAGACTACTTGAGCTTTGTCGCAGGGTCATCTGTTGATGAACTTGGTGACTTCACTGCTGAGCTCAAGCTATCTATTTTCCAGCTTGGAATCAGTCCGCAGATAATAGCGTCCATTATTATGCAGGTACTCTGTCATGTTGTCCCTTCTCTAGTAAAGCTACGGAAAGAAGGTCTGGATGGGCATGAGAAGATTAAGAGTTATATATGGTGGATGTCATTTGGCTTTGCAATTTTGGAAGCTTTAATAGTTGCTTGCTACTCACTTCCATATTCAATTTATGCTGCCAGTTATAGGGTCAAGCATGTAATGGTGACGTCTGTTTTATTGGTTTGTGGTGCAATGACTATTACATGGATATGTGATACCATATCAGAATCTGGATTTGGTCAAGGTTCATCTCTAATCATATGTGTGGGAATACTTACGGGATATATGGAGACATTATACAAAATGCTTACTCAGCTTTCAGTGAGTGCTGTGAGTTGGTGGCCATATGTGCTTGCAGTATTGGGTATCTTTACCATCGTCACTATGTGGGCAGTTGTAGTAACTGAAGGTTGTAGGAAAGTAAAGCTGCAGTACTATGGATTTAAACTTGCTTCAGCTGCAAGAGAGCAATCACCTATTACTGAAGTGGAGCCCTATATTCCTTTCAATATTAATCCAGCAGGGATGCAACCTGTTCTTACCACCTCTTACCTCTTGGCATTTCCAAGCATTCTTGCAAGTCTGCTGAGGTCGCCTTTTTGGGAGCATGCCAAGGAAATATTGAACCCTGAAACTTCTGTTGGTGCTGAGCCATGGGTTTACTATTCCATATATGCTTTCTTTGTCTTCCTGTTCAATATATTCGATATTGCTAACATGCCAAAGGAAATTGCTGATTATTTAAATAAGATGGGTGCAAGAATACCAAACATAAAGCCTGGGAAGGCTACCATAGAGTACCTCTCCAAGGTTCAGGCATCCACACGATTTTGGGGGGGGCTATTGTTAAGTGTTCTGGCCACTACATCAAGTGTTCTTGACCACTATTTACGGCGTATCAATGCTGGATTTGCTATTGGTTTTACATCAGTTCTAATTATTGTCGGTTCCATTATTGAACTTAGAAGATCATATCAAGCATATAATGTGATGCCAAGCTTAAGCAACGCTTTGAGACGATATGGTGTATGA 1668 0.4317 MEATRFSPNHFHPHCFQTKPNTLRERRYVKCINGIGTRVSLFTIPAFNAPNRTLSVNFSDRLRGDYLRVDAPTNELSNEEVVPAVVASSQGADNSGTLQLKPVMFRNRFLNFVRLGSVINGAAESFFKSEIRRRLFVTAVLIVLSRVGYFIPLPGFDRRLIPEDYLSFVAGSSVDELGDFTAELKLSIFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDGHEKIKSYIWWMSFGFAILEALIVACYSLPYSIYAASYRVKHVMVTSVLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLYKMLTQLSVSAVSWWPYVLAVLGIFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSILASLLRSPFWEHAKEILNPETSVGAEPWVYYSIYAFFVFLFNIFDIANMPKEIADYLNKMGARIPNIKPGKATIEYLSKVQASTRFWGGLLLSVLATTSSVLDHYLRRINAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02749 555 Gene3D SecY subunit domain 119 545 IPR023201 -
Pumo5g02749 555 SUPERFAMILY Preprotein translocase SecY subunit 117 540 IPR023201 -
Pumo5g02749 555 Pfam SecY 187 533 IPR002208 GO:0015031|GO:0016020
Pumo5g02749 555 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 125 543 IPR002208 GO:0015031|GO:0016020
Pumo5g02749 555 FunFam Preprotein translocase subunit SCY2, chloroplastic 119 545 - -
Pumo5g02749 555 PRINTS Preprotein translocase SecY subunit signature 431 453 - -
Pumo5g02749 555 PRINTS Preprotein translocase SecY subunit signature 519 537 - -
Pumo5g02749 555 PRINTS Preprotein translocase SecY subunit signature 186 206 - -
Pumo5g02749 555 PRINTS Preprotein translocase SecY subunit signature 262 287 - -
Pumo5g02749 555 PRINTS Preprotein translocase SecY subunit signature 227 250 - -
Pumo5g02749 555 PRINTS Preprotein translocase SecY subunit signature 386 405 - -
Pumo5g02749 555 PRINTS Preprotein translocase SecY subunit signature 135 153 - -
Pumo5g02749 555 PRINTS Preprotein translocase SecY subunit signature 288 311 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02749 15 555 Miscellaneous Gene Families AT2G31530 73.211 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02749 - - gmx:100803256 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02749 5 74210114 74219860 Pumo5g02749 5 74210114 74219860 ECH